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[193895_at]

Description F23B2.5_rc /REP_DB=WormBase Gene ID /WP=CE09585 /GEN=flp-1 /TR=SW:P41855 /GB=CAB05179.1 /SUBMIT=HINXTON /CHR=4 /FEA=Sanger Annotation /REVCOMP /DEF=FMFRamide neuropeptide precursor
Cluster 6grp_total > 51      4grp_total > 05      6grp_cgc > 93      6grp_cgc_sub > 03      6grp_total_sub > Hat      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 322
1 2 3 4 range
A 160.1
(0.1)
A 		24.6
(-2.6)
A 		6.2
(-3)
A 		300.2
(3)
P 		294
B 132.4
(-0.1)
A 		16.3
(-3)
A 		86.6
(-1.2)
A 		256.5
(3)
P 		240
C 166.6
(-0.2)
A 		63.5
(-2.3)
A 		26.7
(-3)
A 		328
(3)
P 		301
avr 153
(-0.3) 		34.8
(-3) 		39.8
(-2.9) 		294.9
(3) 		260

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 147
1 2 3 4 5 6 range
A 151.1
(0.8)
A 		58.2
(-3)
A 		204.7
(3)
M 		138.4
(0.3)
A 		127.6
(-0.2)
A 		102.6
(-1.2)
A 		147
B 128.4
(-1.8)
A 		164.2
(0.5)
A 		204.4
(3)
A 		144.2
(-0.8)
A 		127.6
(-1.9)
A 		109.5
(-3)
A 		95
C 110.6
(-1.3)
A 		153.5
(1.3)
A 		81.9
(-3)
A 		181.3
(3)
A 		102.7
(-1.7)
A 		118.2
(-0.8)
A 		99
avr 130
(-0.8) 		125.3
(-1.3) 		163.7
(3) 		154.6
(2) 		119.3
(-2) 		110.1
(-3) 		54
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 57
1 2 3 4 range
A 58.3
(3)
A 		5.3
(-2.6)
A 		1.6
(-3)
A 		43.9
(1.5)
P 		57
B 42.2
(1.5)
A 		4
(-3)
A 		20.1
(-1.1)
A 		54.7
(3)
P 		51
C 55.2
(3)
A 		18.2
(-1.8)
A 		9.3
(-3)
A 		55.3
(3)
P 		46
avr 51.9
(3) 		9.2
(-3) 		10.3
(-2.8) 		51.3
(2.9) 		43

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 34
1 2 3 4 5 6 range
A 27.9
(-1.2)
A 		20.7
(-3)
A 		44.6
(3)
M 		35.1
(0.6)
A 		38.5
(1.5)
A 		25
(-1.9)
A 		24
B 44.7
(-0.6)
A 		54.7
(3)
A 		49.6
(1.1)
A 		38.2
(-3)
A 		51.8
(1.9)
A 		40.8
(-2.1)
A 		17
C 41
(1.6)
A 		46.9
(3)
A 		20.8
(-3)
A 		36.5
(0.6)
A 		33.2
(-0.1)
A 		39.6
(1.3)
A 		26
avr 37.9
(-0.2) 		40.8
(2.6) 		38.3
(0.1) 		36.6
(-1.5) 		41.2
(3) 		35.1
(-3) 		6
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 193895_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.28140
Sequence Type Exemplar sequence
Representative Public ID F23B2.5 NCBI
Target Description F23B2.5_rc /REP_DB=WormBase Gene ID /WP=CE09585 /GEN=flp-1 /TR=SW:P41855 /GB=CAB05179.1 /SUBMIT=HINXTON /CHR=4 /FEA=Sanger Annotation /REVCOMP /DEF=FMFRamide neuropeptide precursor
Cluster Evidence This cluster is supported by a Sanger Annotation.
Annotation Method Description
Annotation Description This probe set was annotated using the Design Representative Id based pipeline to a Affymetrix Proprietary Database identifier using 1 transcript(s).
Annotation Grade This is a grade R annotation.
Annotation Transcript Cluster (# of Matching Probes) F23B2.5
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
F23B2.5 F23B2.5_rc /REP_DB=WormBase Gene ID /WP=CE09585 /GEN=flp-1 /TR=SW:P41855 /GB=CAB05179.1 /SUBMIT=HINXTON /CHR=4 /FEA=Sanger Annotation /REVCOMP /DEF=FMFRamide neuropeptide precursor None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
NM_182277 9/11 Negative Strand Matching Probes A B 
NM_069191 11/11 Negative Strand Matching Probes A B 
SNAP00000024643 11/11 Negative Strand Matching Probes None
GENEFINDER00000024651 11/11 Negative Strand Matching Probes None
F23B2.5a 11/11 Negative Strand Matching Probes A B 
F23B2.5b 9/11 Negative Strand Matching Probes A B 
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrIV:9144699-9145964(-) 100.0 100.0
Sequence
Target Sequence 
>C. ELEGANS:193895_AT
gctagcctttccgaatcgcaagaagtttggttgagatcgtccgaatcgaaggaagttcgg
gtctgaaccggctttctttcccagcgactttacagctgctgatcgcccatatctcataaa
gtttggctttctcttttccatcttttgcagtgccacctcggcatcaccatcgcagttttc
acctataaagttcatcacttcattttgctccatggtggagagcatcgagaagaccgtaca
aaagtctgaagtggctcccggtgtgcaacattctgccgacaccttataagtagctgcca

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GCTAGCCTTTCCGAATCGCAAGAAG 386 303 205 Antisense
GAAGTTTGGTTGAGATCGTCCGAAT 516 335 226 Antisense
TTCTTTCCCAGCGACTTTACAGCTG 511 687 278 Antisense
GCGACTTTACAGCTGCTGATCGCCC 507 287 288 Antisense
GCTGATCGCCCATATCTCATAAAGT 375 295 302 Antisense
ACCATCGCAGTTTTCACCTATAAAG 680 85 370 Antisense
TCACTTCATTTTGCTCCATGGTGGA 24 627 399 Antisense
GGAGAGCATCGAGAAGACCGTACAA 645 517 421 Antisense
ACAAAAGTCTGAAGTGGCTCCCGGT 610 111 442 Antisense
GGTGTGCAACATTCTGCCGACACCT 491 499 464 Antisense
GCCGACACCTTATAAGTAGCTGCCA 306 283 479 Antisense
Sequence Source Affymetrix Proprietary Database