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[193691_at] UDP-glucose:glycoprotein glucosyltransferase like

Description F26H9.8 /REP_DB=WormBase Gene ID /WP=CE09713 /TR=P91854 /GB=CAB03874.1 /SUBMIT=HINXTON /CHR=1 /FEA=Sanger Annotation /DEF=UDP-glucose:glycoprotein glucosyltransferase like
Cluster 6grp_total > 58      4grp_total > 40      6grp_total_sub > Cup      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 42
1 2 3 4 range
A 5.7
(-2.5)
A 		2.2
(-3)
A 		44
(3)
A 		8.9
(-2)
A 		42
B 2.6
(-3)
A 		2.8
(-2.8)
A 		3.8
(-1.9)
A 		9.1
(3)
A 		7
C 1.7
(-3)
A 		2.6
(-2)
A 		3.9
(-0.5)
A 		6.9
(3)
A 		5
avr 3.3
(-2.7) 		2.5
(-3) 		17.2
(3) 		8.3
(-0.6) 		15

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 33
1 2 3 4 5 6 range
A 7.8
(-1.3)
A 		5.7
(-2.1)
A 		19.7
(3)
A 		4.8
(-2.4)
A 		15.4
(1.4)
A 		3.2
(-3)
A 		17
B 27.8
(3)
A 		5.5
(-2.2)
A 		2.4
(-2.9)
A 		2
(-3)
A 		1.9
(-3)
A 		24.7
(2.3)
A 		26
C 10.2
(-1.9)
A 		21.9
(0.5)
A 		4.9
(-3)
A 		16.9
(-0.6)
A 		5.1
(-3)
A 		34.4
(3)
A 		30
avr 15.3
(0.5) 		11
(-1.4) 		9
(-2.3) 		7.9
(-2.8) 		7.5
(-3) 		20.8
(3) 		13
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 11
1 2 3 4 range
A 2.1
(-2.1)
A 		0.5
(-3)
A 		11.5
(3)
A 		1.3
(-2.6)
A 		11
B 0.8
(-2.5)
A 		0.7
(-3)
A 		0.9
(-2)
A 		1.9
(3)
A 		1
C 0.5
(-3)
A 		0.7
(-1.7)
A 		1.4
(3)
A 		1.2
(1.7)
A 		1
avr 1.1
(-2.3) 		0.6
(-3) 		4.6
(3) 		1.5
(-1.7) 		4

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 11
1 2 3 4 5 6 range
A 1.4
(-2.1)
A 		2
(-1.1)
A 		4.3
(2.5)
A 		1.2
(-2.4)
A 		4.6
(3)
A 		0.8
(-3)
A 		4
B 9.7
(3)
A 		1.8
(-2.2)
A 		0.6
(-2.9)
A 		0.5
(-3)
A 		0.8
(-2.8)
A 		9.2
(2.7)
A 		9
C 3.8
(-1.5)
A 		6.7
(0.2)
A 		1.3
(-3)
A 		3.4
(-1.8)
A 		1.6
(-2.8)
A 		11.5
(3)
A 		10
avr 5
(0.6) 		3.5
(-1) 		2.1
(-2.6) 		1.7
(-3) 		2.3
(-2.3) 		7.2
(3) 		6
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 193691_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.1266
Sequence Type Exemplar sequence
Representative Public ID F26H9.8 NCBI
Target Description F26H9.8 /REP_DB=WormBase Gene ID /WP=CE09713 /TR=P91854 /GB=CAB03874.1 /SUBMIT=HINXTON /CHR=1 /FEA=Sanger Annotation /DEF=UDP-glucose:glycoprotein glucosyltransferase like
Cluster Evidence This cluster is supported by a Sanger Annotation.
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_060083(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_060083 NCBI Caenorhabditis elegans F26H9.8 (F26H9.8) mRNA, complete cds. 11/11 None
GENEFINDER00000040487 ENSEMBL cdna:GeneFinder chromosome:CEL140:I:9330729:9335284:1 11/11 None
SNAP00000040480 ENSEMBL cdna:SNAP chromosome:CEL140:I:9331133:9335284:1 11/11 None
F26H9.8 ENSEMBL cdna:known chromosome:CEL140:I:9325859:9335335:1 gene:F26H9.8 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrI:9325789-9335215(+) 100.0 100.0
Public Domain and Genome References
Gene Title UDP-glucose:glycoprotein glucosyltransferase like
Ensembl F26H9.8
Entrez Gene 172758 Entrez gene
SwissProt P91854 EMBL-EBI
WormBase CE09713 Wormbase
Functional Annotations
Gene Ontology
GO Biological Process (view graph)
ID Description Evidence Links
16051 carbohydrate biosynthesis inferred from electronic annotation QuickGO AmiGO
GO Molecular Function (view graph)
ID Description Evidence Links
16758 transferase activity, transferring hexosyl groups inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast CAB04207 Hypothetical protein F26H9.8 [Caenorhabditis elegans] emb|CAB03874.1| Hypothetical protein F26H9.8 [Caenorhabditis elegans] ref|NP_492484.1| F26H9.8 [Caenorhabditis elegans] 0.0
blast CAE74313 Hypothetical protein CBG22023 [Caenorhabditis briggsae] 0.0
blast CAE70223 Hypothetical protein CBG16703 [Caenorhabditis briggsae] 0.0
Protein Domains
Database ID Description E-Value
Pfam IPR009448 EMBL-EBI UDP-glucose:Glycoprotein Glucosyltransferase 1.3E-125
Pfam IPR009448 EMBL-EBI UDP-glucose:Glycoprotein Glucosyltransferase 1.3E-125
Pfam IPR009448 EMBL-EBI UDP-glucose:Glycoprotein Glucosyltransferase 1.3E-125
Sequence
Target Sequence 
>C. ELEGANS:193691_AT
gatgccgatcaagttgttcgagctgatttacaagaattgatggatttcaatttaaatggg
gctccttatggatatgttccattttgtgagagtcgaacagagatggatggattccgattt
tggaaaagtggatattggaagaatcatttgatggggcgaaaatatcatattagtgcactt
tatgttgttgatcttaaggcgttccgcgagttctcagctggagaccgccttcgtggtcgg
tacgacagcctatctgctgatccgaacagtctttcgaatttggatcaagatcttccgaac
aacatgcttcacgaagttcctattaaatcattacctcaggaatggctttggtgtgagaca
tggtgtgatgatggaagtaaagaaaaggcaaaaacaattgacttgtgcaacaatccactg
acaaaagaaccaaaactgaactcggcaaaacgtattatcaaagaatggacagaatacgat
tcagaaatttcgaaagttttgaattctgcagatatcaacactcca

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GATGCCGATCAAGTTGTTCGAGCTG 157 415 3592 Antisense
TGGGGCTCCTTATGGATATGTTCCA 484 551 3648 Antisense
TAGTGCACTTTATGTTGTTGATCTT 706 653 3762 Antisense
TGTTGATCTTAAGGCGTTCCGCGAG 679 561 3777 Antisense
GTTCCGCGAGTTCTCAGCTGGAGAC 265 441 3792 Antisense
CGTGGTCGGTACGACAGCCTATCTG 390 243 3823 Antisense
GCCTATCTGCTGATCCGAACAGTCT 84 281 3839 Antisense
GAACAGTCTTTCGAATTTGGATCAA 135 351 3855 Antisense
TCTTCCGAACAACATGCTTCACGAA 663 617 3882 Antisense
GACTTGTGCAACAATCCACTGACAA 461 371 3991 Antisense
GAATTCTGCAGATATCAACACTCCA 78 325 4092 Antisense
Sequence Source Affymetrix Proprietary Database