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[192691_s_at] Mouse adipocyte P27 protein like

Description R11D1.11 /REP_DB=WormBase Gene ID /WP=CE06316 /TR=SW:Q21929 /GB=CAA99897.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation /DEF=Mouse adipocyte P27 protein like
Cluster 6grp_highest_10_10 > 25      6grp_high1_10_10 > 41      4grp_highest_8_8 > 05      4grp_high_8_8 > 30      6grp_highest_nonorm > 34      6grp_total > 52      4grp_total > 25      6grp_highest_sub > 03      6grp_cgc > 82      6grp_high1_sub > 03      6grp_cgc_sub > 03      6grp_total_sub > Hat      6grp_rule_based > S3      4grp_rule_based > L4      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 1606
1 2 3 4 range
A 848.3
(-3)
P 		1939.4
(1.1)
P 		1583.1
(-0.3)
P 		2453.8
(3)
P 		1606
B 894
(-3)
P 		1874.9
(0.8)
P 		2015.8
(1.3)
P 		2447.2
(3)
P 		1553
C 897.7
(-3)
P 		1796.2
(0.7)
P 		1965.5
(1.5)
P 		2337.1
(3)
P 		1439
avr 880
(-3) 		1870.2
(0.9) 		1854.8
(0.8) 		2412.7
(3) 		1533

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 2538
1 2 3 4 5 6 range
A 2093.6
(-2)
P 		2854.6
(-0)
P 		4017.4
(3)
P 		2971
(0.3)
P 		1871
(-2.6)
P 		1714.3
(-3)
P 		2303
B 2190.4
(-1.9)
P 		3092.9
(0.2)
P 		4251.8
(3)
P 		2158.4
(-2)
P 		1874.4
(-2.7)
P 		1731.8
(-3)
P 		2520
C 2271.1
(-0.9)
P 		3064.7
(2.2)
P 		3278.8
(3)
P 		2668.5
(0.6)
P 		1891.2
(-2.4)
P 		1739.9
(-3)
P 		1539
avr 2185
(-1.7) 		3004.1
(0.6) 		3849.3
(3) 		2599.3
(-0.5) 		1878.9
(-2.6) 		1728.7
(-3) 		2121
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 400
1 2 3 4 range
A 308.9
(-3)
P 		421
(3)
P 		413.9
(2.6)
P 		359.2
(-0.3)
P 		112
B 285.1
(-3)
P 		463.1
(1.5)
P 		467.1
(1.6)
P 		521.5
(3)
P 		236
C 297.2
(-3)
P 		516.4
(0.4)
P 		685.1
(3)
P 		394.1
(-1.5)
P 		388
avr 297.1
(-3) 		466.8
(1.5) 		522
(3) 		424.9
(0.4) 		225

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 647
1 2 3 4 5 6 range
A 385.9
(-3)
P 		1015.3
(3)
P 		874.9
(1.7)
P 		753.5
(0.5)
P 		564.6
(-1.3)
P 		417.4
(-2.7)
P 		629
B 762.2
(-0.5)
P 		1029.5
(3)
P 		1032.5
(3)
P 		571.7
(-3)
P 		761.6
(-0.5)
P 		645.8
(-2)
P 		461
C 841.8
(1.6)
P 		935.1
(3)
P 		834.5
(1.5)
P 		536.6
(-3)
P 		611.9
(-1.9)
P 		582.5
(-2.3)
P 		399
avr 663.3
(-1.5) 		993.3
(3) 		914
(1.9) 		620.6
(-2) 		646
(-1.7) 		548.6
(-3) 		445
NetAffx Links Cluster Members
Consensus/Exemplar
Group Members
GeneChip Array Information
Probe Set ID 192691_s_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.14084
Sequence Type Exemplar sequence
Representative Public ID R11D1.11 NCBI
Target Description R11D1.11 /REP_DB=WormBase Gene ID /WP=CE06316 /TR=SW:Q21929 /GB=CAA99897.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation /DEF=Mouse adipocyte P27 protein like
Cluster Evidence This cluster is supported by a Sanger Annotation.
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_073781(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_073781 NCBI Caenorhabditis elegans DeHydrogenases, Short chain family member (dhs-21) (dhs-21) mRNA, complete cds. 11/11 None
SNAP00000040859 ENSEMBL cdna:SNAP chromosome:CEL140:V:12734422:12735318:-1 11/11 None
GENEFINDER00000040871 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:12734422:12735260:-1 11/11 None
R11D1.11 ENSEMBL cdna:known chromosome:CEL140:V:12734386:12735318:-1 gene:R11D1.11 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:12734421-12735318(-) 100.0 100.0
Public Domain and Genome References
Gene Title Mouse adipocyte P27 protein like
Gene Symbol dhs-21
Ensembl R11D1.11
Entrez Gene 179741 Entrez gene
SwissProt Q21929 EMBL-EBI
WormBase CE06316 Wormbase
Functional Annotations
Ortholog
ID Title Organism
CANINE_2:CFA.21109.1.S1_S_AT similar to dicarbonyl L-xylulose reductase cfa
DROSOPHILA_2:1623769_AT dm
DROSGENOME1:145332_AT dm
CHICKEN:GGA.2276.1.S1_A_AT dicarbonyl/L-xylulose reductase gga
HG-U133_PLUS_2:217973_AT dicarbonyl/L-xylulose reductase hs
HG-U133A:217973_AT dicarbonyl/L-xylulose reductase hs
HG-FOCUS:217973_AT dicarbonyl/L-xylulose reductase hs
HG-U133A_2:217973_AT dicarbonyl/L-xylulose reductase hs
HU35KSUBA:Z20777_AT dicarbonyl/L-xylulose reductase hs
HU35KSUBA:RC_AA433946_AT dicarbonyl/L-xylulose reductase hs
U133_X3P:G7705924_3P_S_AT dicarbonyl/L-xylulose reductase hs
HG-U95B:57729_AT dicarbonyl/L-xylulose reductase hs
MG-U74BV2:109171_AT dicarbonyl L-xylulose reductase mm
MG-U74BV2:165378_I_AT dicarbonyl L-xylulose reductase mm
MG-U74CV2:165948_I_AT dicarbonyl L-xylulose reductase mm
MOE430A:1419456_AT dicarbonyl L-xylulose reductase mm
MOUSE430A_2:1419456_AT dicarbonyl L-xylulose reductase mm
MOUSE430_2:1419456_AT dicarbonyl L-xylulose reductase mm
MU19KSUBA:TC19413_S_AT DCXR mRNA for Dicarbonyl/L-Xylulose Reductase mm
MU19KSUBA:TC19414_AT DCXR mRNA for Dicarbonyl/L-Xylulose Reductase mm
MU19KSUBC:TC41397_AT DCXR mRNA for Dicarbonyl/L-Xylulose Reductase mm
MU19KSUBC:TC41397_G_AT DCXR mRNA for Dicarbonyl/L-Xylulose Reductase mm
Gene Ontology
GO Biological Process (view graph)
ID Description Evidence Links
8152 metabolism inferred from electronic annotation QuickGO AmiGO
GO Molecular Function (view graph)
ID Description Evidence Links
16491 oxidoreductase activity inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast CAA99897 Hypothetical protein R11D1.11 [Caenorhabditis elegans] ref|NP_506182.1| DeHydrogenases, Short chain family member (dhs-21) [Caenorhabditis elegans] sp|Q21929|CBR2_CAEEL Probable carbonyl reductase [NADPH] (NADPH-dependent carbonyl reductase) 1.0E-137
blast CAA99897 Hypothetical protein R11D1.11 [Caenorhabditis elegans] ref|NP_506182.1| DeHydrogenases, Short chain family member (dhs-21) [Caenorhabditis elegans] sp|Q21929|CBR2_CAEEL Probable carbonyl reductase [NADPH] (NADPH-dependent carbonyl reductase) 1.0E-125
blast CAE63980 Hypothetical protein CBG08572 [Caenorhabditis briggsae] 1.0E-119
blast NP_599214 dicarbonyl L-xylulose reductase [Rattus norvegicus] sp|Q920P0|DCXR_RAT L-xylulose reductase (XR) (Dicarbonyl/L-xylulose reductase) dbj|BAB64340.1| diacetyl/L-xylulose reductase [Rattus norvegicus] 1.0E-56
Protein Domains
Database ID Description E-Value
Pfam IPR002198 EMBL-EBI Short-chain dehydrogenase/reductase SDR 6.2E-60
Pfam IPR002198 EMBL-EBI Short-chain dehydrogenase/reductase SDR 9.9E-59
Sequence
Target Sequence 
>C. ELEGANS:192691_S_AT
gaagaggtccttttcaaacttatcgtaccacatttcccaattcatggtcttgtaaataat
gctggaattgcaacaaatcatgcaattggacaaattactcaacaatcaattgatagaaca
tttgcagtcaacgtaaggggacctattctcattgcacaattagttgctagaaactttgtg
gatagacaaatcaaaggatcaattgttaatatttcatcacaagcagccattcgtccattg
gataatcacactgtttattgtgcatcaaaagctgctcttgatatggtcacaagatgtctt
gcaaatgaattgggatcccagaatattcgagttaatagtgtcaatccaactgttgtgatg
actgatatgggaagagataactggagtgatcctgataagaagaagaagatgctcgacaga
atgccgatcaaacgttttgctgaggttgacgaagttgtgaatgctgtccttttccttctt
tcagacaatgcttcaatgactactggatccactt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GAAGAGGTCCTTTTCAAACTTATCG 326 335 223 Antisense
TCAAACTTATCGTACCACATTTCCC 531 629 236 Antisense
CACATTTCCCAATTCATGGTCTTGT 333 195 251 Antisense
GTAAGGGGACCTATTCTCATTGCAC 245 461 355 Antisense
TCATCACAAGCAGCCATTCGTCCAT 283 621 436 Antisense
AAAGCTGCTCTTGATATGGTCACAA 157 125 490 Antisense
GAAGATGCTCGACAGAATGCCGATC 477 337 627 Antisense
GAATGCCGATCAAACGTTTTGCTGA 361 331 641 Antisense
GAAGTTGTGAATGCTGTCCTTTTCC 551 337 673 Antisense
GTCCTTTTCCTTCTTTCAGACAATG 162 447 688 Antisense
GCTTCAATGACTACTGGATCCACTT 368 305 712 Antisense
Sequence Source Affymetrix Proprietary Database