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[191502_at] UDP-glucuronosyltransferase

Description ZC443.5 /REP_DB=WormBase Gene ID /WP=CE06589 /TR=Q23323 /GB=CAA99950.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation /DEF=UDP-glucuronosyltransferase
Cluster 6grp_highest_10_10 > 0      6grp_high1_10_10 > 70      6grp_highest_nonorm > 64      6grp_total > 80      4grp_total > 47      6grp_cgc > 95      6grp_high1_sub > 04      6grp_cgc_sub > 04      6grp_total_sub > Hat      4grp_rule_based > L1      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 1035
1 2 3 4 range
A 986.6
(3)
P 		170.5
(-2.6)
P 		166.9
(-2.6)
P 		110.3
(-3)
A 		876
B 1017.5
(3)
P 		158.5
(-2.5)
P 		157.7
(-2.5)
P 		80.6
(-3)
A 		937
C 1115.8
(3)
P 		190.2
(-2.5)
P 		160
(-2.7)
P 		104.5
(-3)
A 		1011
avr 1040
(3) 		173.1
(-2.5) 		161.5
(-2.6) 		98.5
(-3) 		942

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 732
1 2 3 4 5 6 range
A 736.4
(-1.7)
P 		747
(-1.6)
P 		633.5
(-2.5)
P 		1306.4
(3)
P 		574.2
(-3)
P 		697
(-2)
P 		732
B 758.7
(0.8)
P 		627.4
(-2.4)
P 		659.3
(-1.6)
P 		844.9
(3)
P 		698.7
(-0.7)
P 		604.6
(-3)
P 		240
C 939.9
(2.1)
P 		674.9
(-2.6)
P 		751.9
(-1.2)
P 		988.4
(3)
P 		653.2
(-3)
P 		715.5
(-1.9)
P 		335
avr 811.7
(-0.5) 		683.1
(-2.4) 		681.6
(-2.4) 		1046.6
(3) 		642
(-3) 		672.4
(-2.5) 		405
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 353
1 2 3 4 range
A 359.2
(3)
P 		37
(-2.6)
P 		43.6
(-2.5)
P 		16.1
(-3)
A 		343
B 324.5
(3)
P 		39.2
(-2.6)
P 		36.5
(-2.6)
P 		17.2
(-3)
A 		307
C 369.4
(3)
P 		54.7
(-2.4)
P 		55.8
(-2.3)
P 		17.6
(-3)
A 		352
avr 351
(3) 		43.6
(-2.5) 		45.3
(-2.5) 		17
(-3) 		334

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 213
1 2 3 4 5 6 range
A 135.8
(-3)
P 		265.7
(1)
P 		138
(-2.9)
P 		331.3
(3)
P 		173.3
(-1.8)
P 		169.7
(-2)
P 		196
B 264
(2)
P 		208.8
(-0.6)
P 		160.1
(-3)
P 		223.8
(0.1)
P 		283.9
(3)
P 		225.5
(0.2)
P 		124
C 348.4
(3)
P 		205.9
(-2.4)
P 		191.4
(-3)
P 		198.8
(-2.7)
P 		211.4
(-2.2)
P 		239.5
(-1.2)
P 		157
avr 249.4
(2.9) 		226.8
(1.3) 		163.2
(-3) 		251.3
(3) 		222.9
(1.1) 		211.6
(0.3) 		88
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 191502_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.13065
Sequence Type Exemplar sequence
Representative Public ID ZC443.5 NCBI
Target Description ZC443.5 /REP_DB=WormBase Gene ID /WP=CE06589 /TR=Q23323 /GB=CAA99950.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation /DEF=UDP-glucuronosyltransferase
Cluster Evidence This cluster is supported by a Sanger Annotation.
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_073808(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_073808 NCBI Caenorhabditis elegans ZC443.5 (UDP-glucuronosyltransferase) mRNA, complete cds. 11/11 None
SNAP00000030946 ENSEMBL cdna:SNAP chromosome:CEL140:V:12822922:12825167:1 10/11 None
ZC443.5 ENSEMBL cdna:known chromosome:CEL140:V:12822854:12825347:1 gene:ZC443.5 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:12821909-12825343(+) 100.0 100.0
Public Domain and Genome References
Gene Title UDP-glucuronosyltransferase
Gene Symbol ugt-18
Ensembl ZC443.5
Entrez Gene 179759 Entrez gene
SwissProt Q23323 EMBL-EBI
WormBase CE30714 Wormbase
Functional Annotations
Ortholog
ID Title Organism
DROSOPHILA_2:1633719_AT dm
DROSGENOME1:149667_AT dm
Gene Ontology
GO Biological Process (view graph)
ID Description Evidence Links
8152 metabolism inferred from electronic annotation QuickGO AmiGO
GO Molecular Function (view graph)
ID Description Evidence Links
16758 transferase activity, transferring hexosyl groups inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast CAA99950 Hypothetical protein ZC443.5 [Caenorhabditis elegans] ref|NP_506209.2| ZC443.5 [Caenorhabditis elegans] 0.0
blast CAE56885 Hypothetical protein CBG24724 [Caenorhabditis briggsae] 0.0
blast CAE64007 Hypothetical protein CBG08602 [Caenorhabditis briggsae] 0.0
Protein Domains
Database ID Description E-Value
Pfam IPR002213 EMBL-EBI UDP-glucoronosyl/UDP-glucosyl transferase 2.6E-42
Pfam IPR002213 EMBL-EBI UDP-glucoronosyl/UDP-glucosyl transferase 3.6E-40
Trans Membrane
ID Number Of Domains Domain Boundaries
NP_506209.2 1 499-521
ZC443.5 1 499-521
Sequence
Target Sequence 
>C. ELEGANS:191502_AT
atgcctgagattactttcatctggaaatatgaagaagccaatgcaactttgactagtcat
ctgccaaatgtgaaacttaccacgtggatgccacaaaacgatttgttagctgatgatcgt
ttgacactattcgtcacccatggtgggttgggcagtacaatggagttagcttatcagggg
aaaccggcactgataattccccttatggctgatcagccaagaaatgctcatatgctcaaa
aggcacggaggatgtcttcagtatcacaaaaccatgcttggggactccgaacaattatta
aaagcttttaaaactgtactgactgagagaaaatattctgaaaatgctcagagacttgct
agaatcttgagagatcaaccagtttctccaaaggatcttgttttaaagcactgcgaattt
gcagttgaacatggggctctaaatt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
ATGCCTGAGATTACTTTCATCTGGA 581 41 1117 Antisense
GCAACTTTGACTAGTCATCTGCCAA 673 319 1159 Antisense
TGTGAAACTTACCACGTGGATGCCA 631 553 1185 Antisense
GATCGTTTGACACTATTCGTCACCC 480 415 1231 Antisense
TTCGTCACCCATGGTGGGTTGGGCA 2 697 1246 Antisense
GGAAACCGGCACTGATAATTCCCCT 641 525 1295 Antisense
TAATTCCCCTTATGGCTGATCAGCC 678 633 1310 Antisense
GGCACGGAGGATGTCTTCAGTATCA 361 535 1358 Antisense
AAACCATGCTTGGGGACTCCGAACA 687 125 1385 Antisense
AGATCAACCAGTTTCTCCAAAGGAT 201 65 1488 Antisense
GCAGTTGAACATGGGGCTCTAAATT 55 311 1537 Antisense
Sequence Source Affymetrix Proprietary Database