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[191478_at] UDP-glucuronosyltransferase

Description C44H9.1 /REP_DB=WormBase Gene ID /WP=CE05418 /TR=Q18629 /GB=CAA99782.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation /DEF=UDP-glucuronosyltransferase
Cluster 6grp_highest_10_10 > 10      6grp_high1_10_10 > 34      4grp_highest_8_8 > 61      4grp_high_8_8 > 18      6grp_highest_nonorm > 80      6grp_total > 03      4grp_total > 30      6grp_cgc > 40      6grp_high1_sub > 02      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 208
1 2 3 4 range
A 219
(3)
P 		139.7
(-0.3)
P 		73
(-3)
P 		153.9
(0.3)
P 		146
B 269.4
(2.8)
P 		118.2
(-2.3)
P 		97.9
(-3)
P 		276.7
(3)
P 		179
C 281
(3)
P 		141.1
(-1.7)
P 		103
(-3)
P 		224.2
(1.1)
P 		178
avr 256.5
(3) 		133
(-1.5) 		91.3
(-3) 		218.3
(1.6) 		165

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 143
1 2 3 4 5 6 range
A 179.4
(1.4)
P 		163.9
(0.5)
P 		162.1
(0.4)
P 		207.2
(3)
P 		172.6
(1)
P 		104.3
(-3)
P 		103
B 187.3
(-0.7)
P 		247.4
(3)
P 		156.7
(-2.6)
P 		192.3
(-0.4)
P 		150.7
(-3)
P 		217.8
(1.2)
P 		97
C 216.6
(2.1)
P 		212.2
(1.8)
P 		127.8
(-3)
P 		232.7
(3)
P 		133
(-2.7)
P 		184.7
(0.3)
P 		105
avr 194.4
(1.4) 		207.8
(2.7) 		148.9
(-3) 		210.7
(3) 		152.1
(-2.7) 		168.9
(-1.1) 		62
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 74
1 2 3 4 range
A 79.7
(3)
P 		30.3
(-1.9)
P 		19.1
(-3)
P 		22.5
(-2.7)
P 		61
B 85.9
(3)
P 		29.2
(-2.4)
P 		22.7
(-3)
P 		59
(0.4)
P 		63
C 93
(3)
P 		40.6
(-2.5)
P 		35.9
(-3)
P 		37.8
(-2.8)
P 		57
avr 86.2
(3) 		33.4
(-2.3) 		25.9
(-3) 		39.8
(-1.6) 		60

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 57
1 2 3 4 5 6 range
A 33.1
(-1.6)
P 		58.3
(3)
P 		35.3
(-1.2)
P 		52.5
(1.9)
P 		52.1
(1.9)
P 		25.4
(-3)
P 		33
B 65.2
(0.7)
P 		82.3
(3)
P 		38
(-3)
P 		50.9
(-1.3)
P 		61.2
(0.1)
P 		81.2
(2.9)
P 		44
C 80.3
(3)
P 		64.7
(1)
P 		32.5
(-3)
P 		46.8
(-1.2)
P 		43
(-1.7)
P 		61.8
(0.7)
P 		48
avr 59.5
(1.4) 		68.4
(3) 		35.3
(-3) 		50.1
(-0.3) 		52.1
(0) 		56.1
(0.8) 		33
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 191478_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.13281
Sequence Type Exemplar sequence
Representative Public ID C44H9.1 NCBI
Target Description C44H9.1 /REP_DB=WormBase Gene ID /WP=CE05418 /TR=Q18629 /GB=CAA99782.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation /DEF=UDP-glucuronosyltransferase
Cluster Evidence This cluster is supported by a Sanger Annotation.
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_073810(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_073810 NCBI Caenorhabditis elegans C44H9.1 (UDP-glucuronosyltransferase) mRNA, complete cds. 11/11 None
SNAP00000031457 ENSEMBL cdna:SNAP chromosome:CEL140:V:12831418:12832647:1 11/11 None
GENEFINDER00000031467 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:12830424:12832647:1 10/11 None
C44H9.1 ENSEMBL cdna:known chromosome:CEL140:V:12830368:12832676:1 gene:C44H9.1 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:12830423-12832647(+) 100.0 100.0
Public Domain and Genome References
Gene Title UDP-glucuronosyltransferase
Gene Symbol ugt-15
Ensembl C44H9.1
Entrez Gene 183462 Entrez gene
SwissProt Q18629 EMBL-EBI
WormBase CE05418 Wormbase
Functional Annotations
Gene Ontology
GO Biological Process (view graph)
ID Description Evidence Links
8152 metabolism inferred from electronic annotation QuickGO AmiGO
GO Molecular Function (view graph)
ID Description Evidence Links
16758 transferase activity, transferring hexosyl groups inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast CAA99782 Hypothetical protein C44H9.1 [Caenorhabditis elegans] ref|NP_506211.1| C44H9.1 [Caenorhabditis elegans] 0.0
blast CAE56882 Hypothetical protein CBG24721 [Caenorhabditis briggsae] 0.0
blast CAA96584 Hypothetical protein C08B6.1 [Caenorhabditis elegans] ref|NP_505597.2| C08B6.1 [Caenorhabditis elegans] 0.0
Protein Domains
Database ID Description E-Value
Pfam IPR002213 EMBL-EBI UDP-glucoronosyl/UDP-glucosyl transferase 2.9E-32
Pfam IPR002213 EMBL-EBI UDP-glucoronosyl/UDP-glucosyl transferase 5.9E-27
Pfam IPR002213 EMBL-EBI UDP-glucoronosyl/UDP-glucosyl transferase 3.7E-29
Trans Membrane
ID Number Of Domains Domain Boundaries
NP_506211.1 1 497-519
C44H9.1 1 497-519
SNAP00000031457 1 297-319
Sequence
Target Sequence 
>C. ELEGANS:191478_AT
atcgatgccggaaaccacttttatttggaaatatgaacaagaaaatgcaacgttagcaga
tcaactttcgaatgtcaaattgactacttggatgccacaaaatgatattcttgcggatga
acgattaacactttttgtcactcacggaggtcttggaagttcaatggaattggcatatca
agggaaaccagcagttgttattccactaatggctgatcaaccgagaaatgcactaatgct
cacaagacacggtggtgctcttcaattggataaaacttttttgaataattcagaaaaaat
tagagaagccatacagactgttatggaaaatccgagctacaagaaaaatgcagaaaaatt
ggcaaatatactttcttcacagcctcatcaaccaaaagacgttgttctgaaacattgtga
ttttgcagtcaaacatggagatttgaaaactttaaactcagaaggcagacatttaaatgt
gttccaatattactcgattgatattgctttagctgctggactatttcttgtaaca

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
ATCGATGCCGGAAACCACTTTTATT 521 33 996 Antisense
TAGCAGATCAACTTTCGAATGTCAA 380 651 1049 Antisense
AACACTTTTTGTCACTCACGGAGGT 572 135 1122 Antisense
GCAGTTGTTATTCCACTAATGGCTG 88 313 1186 Antisense
TGCACTAATGCTCACAAGACACGGT 94 577 1224 Antisense
AGACACGGTGGTGCTCTTCAATTGG 98 73 1240 Antisense
GCAAATATACTTTCTTCACAGCCTC 22 319 1357 Antisense
TTCACAGCCTCATCAACCAAAAGAC 6 685 1371 Antisense
AAATGTGTTCCAATATTACTCGATT 211 121 1470 Antisense
ACTCGATTGATATTGCTTTAGCTGC 1 99 1487 Antisense
AGCTGCTGGACTATTTCTTGTAACA 452 81 1506 Antisense
Sequence Source Affymetrix Proprietary Database