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[191418_at] UDP-glucuronosyltransferase

Description ZC443.6 /REP_DB=WormBase Gene ID /WP=CE06590 /TR=Q18636 /GB=CAA99951.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation /DEF=UDP-glucuronosyltransferase
Cluster 6grp_high1_10_10 > 01      4grp_highest_8_8 > 02      4grp_high_8_8 > 46      6grp_total > 08      4grp_total > 49      6grp_cgc > 10      6grp_high1_sub > De      6grp_total_sub > Decrease      4grp_rule_based > L2      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 727
1 2 3 4 range
A 383.7
(-3)
P 		876.4
(3)
P 		813
(2.2)
P 		389.9
(-2.9)
P 		493
B 315.6
(-3)
P 		905
(3)
P 		845.4
(2.4)
P 		436.8
(-1.8)
P 		589
C 352.9
(-3)
P 		1016.3
(2.8)
P 		1042.4
(3)
P 		424
(-2.4)
P 		690
avr 350.7
(-3) 		932.6
(3) 		900.3
(2.7) 		416.9
(-2.3) 		582

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 645
1 2 3 4 5 6 range
A 593.5
(3)
P 		298.8
(-0.5)
P 		351.9
(0.1)
P 		347.2
(0.1)
P 		220.5
(-1.4)
P 		86.6
(-3)
A 		507
B 726
(3)
P 		332.9
(-0.7)
P 		362.8
(-0.4)
P 		348
(-0.6)
P 		207.9
(-1.9)
P 		87.9
(-3)
P 		638
C 640.2
(3)
P 		332.6
(-0.3)
P 		277.3
(-0.9)
P 		360.2
(-0)
P 		188
(-1.8)
P 		80.7
(-3)
P 		560
avr 653.2
(3) 		321.4
(-0.5) 		330.7
(-0.4) 		351.8
(-0.2) 		205.5
(-1.7) 		85.1
(-3) 		568
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 306
1 2 3 4 range
A 139.7
(0.2)
P 		190.2
(2.1)
P 		212.5
(3)
P 		57.1
(-3)
P 		155
B 100.6
(-2.7)
P 		223.5
(3)
P 		195.9
(1.7)
P 		93.1
(-3)
P 		130
C 116.8
(-2.1)
P 		292.2
(1.5)
P 		363.3
(3)
P 		71.5
(-3)
P 		292
avr 119
(-1.5) 		235.3
(2.3) 		257.2
(3) 		73.9
(-3) 		183

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 232
1 2 3 4 5 6 range
A 109.4
(3)
P 		106.3
(2.8)
P 		76.6
(0.8)
P 		88.1
(1.6)
P 		66.5
(0.1)
P 		21.1
(-3)
A 		88
B 252.6
(3)
P 		110.8
(-0.9)
P 		88.1
(-1.5)
P 		92.2
(-1.4)
P 		84.5
(-1.6)
P 		32.8
(-3)
P 		220
C 237.3
(3)
P 		101.5
(-0.9)
P 		70.6
(-1.8)
P 		72.4
(-1.7)
P 		60.8
(-2)
P 		27
(-3)
P 		210
avr 199.8
(3) 		106.2
(-0.3) 		78.4
(-1.2) 		84.2
(-1) 		70.6
(-1.5) 		27
(-3) 		173
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 191418_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.13171
Sequence Type Exemplar sequence
Representative Public ID ZC443.6 NCBI
Target Description ZC443.6 /REP_DB=WormBase Gene ID /WP=CE06590 /TR=Q18636 /GB=CAA99951.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation /DEF=UDP-glucuronosyltransferase
Cluster Evidence This cluster is supported by a Sanger Annotation.
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_073809(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_073809 NCBI Caenorhabditis elegans ZC443.6 (UDP-glucuronosyltransferase) mRNA, complete cds. 11/11 None
ZC443.6 ENSEMBL cdna:known chromosome:CEL140:V:12827615:12830017:1 gene:ZC443.6 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000030947 4/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:12827633-12829862(+) 100.0 100.0
Public Domain and Genome References
Gene Title UDP-glucuronosyltransferase
Gene Symbol ugt-16
Ensembl ZC443.6
Entrez Gene 191171 Entrez gene
SwissProt Q18636 EMBL-EBI
WormBase CE06590 Wormbase
Functional Annotations
Ortholog
ID Title Organism
CANINE_2:CFAAFFX.5175.1.S1_S_AT similar to UDP-glucuronosyltransferase 2A1 precursor, microsomal cfa
DROSOPHILA_2:1627662_AT UDP-glycosyltransferase 35a dm
DROSGENOME1:153987_AT UDP-glycosyltransferase 35a dm
Gene Ontology
GO Biological Process (view graph)
ID Description Evidence Links
8152 metabolism inferred from electronic annotation QuickGO AmiGO
GO Molecular Function (view graph)
ID Description Evidence Links
16758 transferase activity, transferring hexosyl groups inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast CAA99951 Hypothetical protein ZC443.6 [Caenorhabditis elegans] emb|CAA99789.1| Hypothetical protein ZC443.6 [Caenorhabditis elegans] ref|NP_506210.1| ZC443.6 [Caenorhabditis elegans] 0.0
blast CAE56882 Hypothetical protein CBG24721 [Caenorhabditis briggsae] 0.0
blast CAA99782 Hypothetical protein C44H9.1 [Caenorhabditis elegans] ref|NP_506211.1| C44H9.1 [Caenorhabditis elegans] 0.0
Protein Domains
Database ID Description E-Value
Pfam IPR002213 EMBL-EBI UDP-glucoronosyl/UDP-glucosyl transferase 7.4E-30
Trans Membrane
ID Number Of Domains Domain Boundaries
NP_506210.1 1 493-515
ZC443.6 1 493-515
Sequence
Target Sequence 
>C. ELEGANS:191418_AT
ttcttgctgacgatcgactaacccttttcataactcacggagggcttggaagttctgtag
agcttgcttatcaagggaaaccagcagttgttatcccattaatggctgatcaaccaagaa
atgctcacatgctcacacgacacggaggtgcccttcaattggataaaacctggttgaata
attcagaaaaacttagagaagccatacagaccgttttgaatgatgtcagttacaaacaca
atgcagaacgtctcgccaaaattcttgaagatcagccacacaaaccgaaggatgtggttc
tgaaacattgtgactttgcagtccagtttggtccattagatactttgaattcagaaggaa
gattattaaatactttccaatattattctgtagatattgttcttgctatttttgttattt
tgtctgttattttgtttgtagtttatcttgttatcaaacttttgttcaggtttcttg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TTCTTGCTGACGATCGACTAACCCT 470 677 1103 Antisense
GACTAACCCTTTTCATAACTCACGG 240 373 1118 Antisense
CTCACGGAGGGCTTGGAAGTTCTGT 106 223 1136 Antisense
GGAAGTTCTGTAGAGCTTGCTTATC 594 531 1150 Antisense
ACATGCTCACACGACACGGAGGTGC 460 107 1229 Antisense
AGAAGCCATACAGACCGTTTTGAAT 562 67 1299 Antisense
AATGCAGAACGTCTCGCCAAAATTC 620 165 1342 Antisense
GACTTTGCAGTCCAGTTTGGTCCAT 554 369 1414 Antisense
GTTTGGTCCATTAGATACTTTGAAT 675 449 1428 Antisense
GTAGATATTGTTCTTGCTATTTTTG 410 457 1492 Antisense
ATCAAACTTTTGTTCAGGTTTCTTG 566 25 1555 Antisense
Sequence Source Affymetrix Proprietary Database