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[191372_at]

Description F55B12.8 /REP_DB=WormBase Gene ID /WP=CE11148 /TR=Q93799 /GB=CAB02130.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation /DEF=G-protein coupled receptor
Cluster 6grp_total > 0      4grp_total > 27      6grp_total_sub > Hat      6grp_cgc > 64      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 94
1 2 3 4 range
A 21.4
(-3)
A 		47.2
(-1.1)
P 		32
(-2.2)
A 		102.6
(3)
P 		81
B 39.4
(-1.9)
P 		65.4
(3)
A 		34.8
(-2.8)
A 		33.7
(-3)
A 		32
C 27.5
(-1.4)
A 		58.8
(1.2)
A 		8.3
(-3)
A 		80.4
(3)
P 		72
avr 29.4
(-2.4) 		57.1
(1.1) 		25
(-3) 		72.2
(3) 		47

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 77
1 2 3 4 5 6 range
A 6.4
(-3)
A 		35.6
(0.9)
A 		51.8
(3)
A 		13.3
(-2.1)
A 		39.1
(1.3)
A 		22.2
(-0.9)
A 		45
B 40.8
(1.9)
A 		28
(-2)
A 		39.2
(1.4)
A 		28.8
(-1.7)
A 		44.4
(3)
A 		24.6
(-3)
A 		20
C 13.7
(-2.6)
A 		83.7
(3)
P 		8.7
(-3)
A 		80.1
(2.7)
A 		25.8
(-1.6)
A 		32.1
(-1.1)
A 		75
avr 20.3
(-3) 		49.1
(3) 		33.2
(-0.3) 		40.7
(1.3) 		36.4
(0.4) 		26.3
(-1.8) 		29
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 14
1 2 3 4 range
A 7.8
(-3)
A 		10.2
(-1)
P 		8.4
(-2.5)
A 		15
(3)
P 		7
B 12.6
(0.6)
P 		16.1
(3)
A 		8.1
(-2.4)
A 		7.2
(-3)
A 		9
C 9.1
(-0.3)
A 		16.9
(3)
A 		2.9
(-3)
A 		13.6
(1.6)
P 		14
avr 9.8
(-0.5) 		14.4
(3) 		6.5
(-3) 		11.9
(1.1) 		8

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 24
1 2 3 4 5 6 range
A 1.2
(-3)
A 		12.7
(3)
A 		11.3
(2.3)
A 		3.4
(-1.9)
A 		11.8
(2.5)
A 		5.4
(-0.8)
A 		12
B 14.2
(0.8)
A 		9.3
(-2)
A 		9.5
(-1.9)
A 		7.6
(-3)
A 		18.1
(3)
A 		9.2
(-2.1)
A 		11
C 5.1
(-2.3)
A 		25.5
(3)
P 		2.2
(-3)
A 		16.1
(0.6)
A 		8.3
(-1.4)
A 		10.8
(-0.8)
A 		23
avr 6.8
(-3) 		15.8
(3) 		7.7
(-2.4) 		9
(-1.5) 		12.7
(0.9) 		8.5
(-1.9) 		9
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 191372_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.14184
Sequence Type Exemplar sequence
Representative Public ID F55B12.8 NCBI
Target Description F55B12.8 /REP_DB=WormBase Gene ID /WP=CE11148 /TR=Q93799 /GB=CAB02130.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation /DEF=G-protein coupled receptor
Cluster Evidence This cluster is supported by a Sanger Annotation.
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
F55B12.8 ENSEMBL cdna:pseudogene chromosome:CEL140:V:13843654:13845122:1 gene:F55B12.8 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000022391 5/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:13842360-13844776(+) 100.0 100.0
Public Domain and Genome References
Ensembl F55B12.8
Sequence
Target Sequence 
>C. ELEGANS:191372_AT
ctcggaggttccgcaatggcagcttatgaaatttctcatttatctcatcttctgactgct
ctcaatcgattttgtgttgtatttttcccattttattacaaaacactattttcgaaattg
ggaacaattgtaataattcatgcaatctgggtagtttctatattattttgtgttttgttt
tatgaaatacttggttgcttattcacctttgatgaagtatcatggacattcggatttctg
acaactaaaaaatgcaatcagatgacctggtataccgatcttattttgaatactgcaatg
ataattataatattggtagtcaacctgctgacagctttcaaagcaggaaaaaacagtcga
tctttgatgaatgctgccggtattaagatgtcaaagaaacaaaaacaacgagaacttgga
tttattaaacaaacatttcttcaaggaatatgtctttttgctggtcaattcacatattat
ctcattgctccattactctcagatactgtgctcttgtttcttctggtatcactttgggc

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
CTCGGAGGTTCCGCAATGGCAGCTT 251 231 406 Antisense
TCATTTATCTCATCTTCTGACTGCT 672 619 441 Antisense
TTCTGACTGCTCTCAATCGATTTTG 151 695 455 Antisense
GGACATTCGGATTTCTGACAACTAA 351 525 629 Antisense
GATGACCTGGTATACCGATCTTATT 569 411 666 Antisense
TTGGTAGTCAACCTGCTGACAGCTT 606 707 718 Antisense
GGAATATGTCTTTTTGCTGGTCAAT 509 533 850 Antisense
TTCACATATTATCTCATTGCTCCAT 139 687 874 Antisense
TCATTGCTCCATTACTCTCAGATAC 365 619 887 Antisense
CAGATACTGTGCTCTTGTTTCTTCT 318 205 905 Antisense
TGTTTCTTCTGGTATCACTTTGGGC 350 561 920 Antisense
Sequence Source Affymetrix Proprietary Database