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[191218_at]

Description F09F3.3 /REP_DB=WormBase Gene ID /WP=CE09286 /TR=P90818 /GB=CAB02903.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation /DEF=G-protein coupled receptor
Cluster 6grp_total > 03      4grp_total > 18      6grp_cgc > 50      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 69
1 2 3 4 range
A 8.2
(-2.6)
A 		6.8
(-2.7)
A 		3.9
(-3)
A 		72.6
(3)
A 		69
B 5.7
(-2.7)
A 		4.7
(-3)
A 		4.6
(-3)
A 		27.8
(3)
A 		23
C 6.9
(-2.5)
A 		38.2
(3)
A 		4.1
(-3)
A 		33.1
(2.1)
A 		34
avr 6.9
(-2.6) 		16.6
(-1.2) 		4.2
(-3) 		44.5
(3) 		40

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 31
1 2 3 4 5 6 range
A 28.1
(3)
A 		13.8
(-0.3)
A 		22
(1.6)
A 		20.3
(1.2)
A 		15
(-0)
A 		2.3
(-3)
A 		26
B 10.8
(-1.3)
A 		15.9
(-0.3)
A 		7.9
(-1.8)
A 		32.7
(3)
A 		20.6
(0.7)
A 		1.8
(-3)
A 		31
C 17
(1.6)
A 		21
(3)
A 		6
(-2.2)
A 		5.8
(-2.2)
A 		5.8
(-2.2)
A 		3.6
(-3)
A 		17
avr 18.6
(2.6) 		16.9
(2) 		12
(0.3) 		19.6
(3) 		13.8
(1) 		2.6
(-3) 		17
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 10
1 2 3 4 range
A 3
(-1.8)
A 		1.5
(-2.7)
A 		1
(-3)
A 		10.6
(3)
A 		10
B 1.8
(-2.1)
A 		1.2
(-2.9)
A 		1.1
(-3)
A 		5.9
(3)
A 		5
C 2.3
(-2.4)
A 		11
(3)
A 		1.4
(-3)
A 		5.6
(-0.4)
A 		10
avr 2.4
(-1.8) 		4.6
(0.3) 		1.2
(-3) 		7.4
(3) 		6

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 8
1 2 3 4 5 6 range
A 5.2
(3)
A 		4.9
(2.6)
A 		4.8
(2.5)
A 		5.2
(3)
A 		4.5
(2.1)
A 		0.6
(-3)
A 		5
B 3.8
(-0.7)
A 		5.3
(0.5)
A 		1.9
(-2.1)
A 		8.7
(3)
A 		8.4
(2.8)
A 		0.7
(-3)
A 		8
C 6.3
(2.9)
A 		6.4
(3)
A 		1.5
(-2.7)
A 		1.2
(-3)
A 		1.9
(-2.2)
A 		1.2
(-3)
A 		5
avr 5.1
(2.5) 		5.5
(3) 		2.7
(-0.6) 		5
(2.4) 		4.9
(2.2) 		0.8
(-3) 		5
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 191218_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.14510
Sequence Type Exemplar sequence
Representative Public ID F09F3.3 NCBI
Target Description F09F3.3 /REP_DB=WormBase Gene ID /WP=CE09286 /TR=P90818 /GB=CAB02903.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation /DEF=G-protein coupled receptor
Cluster Evidence This cluster is supported by a Sanger Annotation.
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
F09F3.3 ENSEMBL cdna:pseudogene chromosome:CEL140:V:13849819:13851003:1 gene:F09F3.3 10/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:13849818-13851020(+) 100.0 100.0
Public Domain and Genome References
Ensembl F09F3.3
Sequence
Target Sequence 
>C. ELEGANS:191218_AT
cagattttattcgttgtatttcccttttgggataacatttcttactggaactccagtcac
gacaattgcgatttgggcaattttgatttcaacttcgtcacttggcgtattttcaatgat
aggtaataacaaaaatgagtgtggctgtgcatgtttatacgacccaaacaagtttatttg
gaccggcgaaagaaaaccttgtgattcattcgcgttagtttttgttccgctttttatatt
tggatcaacaacaatcactaacttgttcaacattatgacagctgtgagattattaatgga
gaaaatgacaggcatgaacgtatttgaggcaaagagaagaagaaaacgatggatgattat
gttttcacagggcgttgctcaagattgcctccaattaatcgatattatcaattcgtatta
tttgtataaattgaatgaagacttatggtttcaagtagtaactatcacgttttcttgtcc
taactacgacactcgatggat

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
CAGATTTTATTCGTTGTATTTCCCT 119 207 267 Antisense
GGAACTCCAGTCACGACAATTGCGA 376 529 313 Antisense
GGGCAATTTTGATTTCAACTTCGTC 377 493 341 Antisense
AACTTCGTCACTTGGCGTATTTTCA 655 137 357 Antisense
GTGGCTGTGCATGTTTATACGACCC 28 491 407 Antisense
GAAAACCTTGTGATTCATTCGCGTT 337 355 458 Antisense
CATTCGCGTTAGTTTTTGTTCCGCT 129 213 473 Antisense
GATTATGTTTTCACAGGGCGTTGCT 700 425 621 Antisense
CAGGGCGTTGCTCAAGATTGCCTCC 243 209 634 Antisense
ACTATCACGTTTTCTTGTCCTAACT 1 103 727 Antisense
GTCCTAACTACGACACTCGATGGAT 204 477 743 Antisense
Sequence Source Affymetrix Proprietary Database