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[190695_s_at]

Description T23F1.7A /REP_DB=WormBase Gene ID /WP=CE21195 /TR=O18119 /GB=CAB03411.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation /DEF=dipeptidyl peptidase IV
Cluster 6grp_high1_10_10 > 24      4grp_high_8_8 > 02      6grp_total > 12      4grp_total > 23      6grp_cgc > 62      6grp_high1_sub > 02      6grp_cgc_sub > 02      6grp_total_sub > Hat      6grp_rule_based > S2      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 137
1 2 3 4 range
A 143.9
(3)
P 		71.5
(-3)
P 		78.3
(-2.4)
P 		116.3
(0.7)
A 		72
B 185.5
(3)
P 		115.3
(-3)
A 		138.1
(-1.1)
P 		156.7
(0.5)
P 		70
C 167.3
(-1.1)
P 		158.3
(-2)
P 		148.7
(-3)
P 		208.3
(3)
P 		60
avr 165.6
(3) 		115
(-3) 		121.7
(-2.2) 		160.4
(2.4) 		51

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 93
1 2 3 4 5 6 range
A 131.1
(-0.8)
A 		170.7
(3)
P 		128.9
(-1)
A 		124
(-1.5)
A 		109.4
(-2.9)
M 		108.4
(-3)
A 		62
B 160.1
(2.3)
P 		171.3
(3)
P 		124.4
(-0)
P 		78.7
(-3)
P 		104.8
(-1.3)
P 		88.3
(-2.4)
P 		93
C 108
(-1.1)
P 		144.6
(1.6)
P 		153.7
(2.3)
A 		163.6
(3)
A 		107.8
(-1.1)
P 		81.9
(-3)
P 		82
avr 133.1
(0.5) 		162.2
(3) 		135.7
(0.7) 		122.1
(-0.5) 		107.3
(-1.8) 		92.9
(-3) 		69
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 44
1 2 3 4 range
A 52.4
(3)
P 		15.5
(-3)
P 		20.5
(-2.2)
P 		17
(-2.8)
A 		37
B 59.2
(3)
P 		28.5
(-3)
A 		32
(-2.3)
P 		33.4
(-2)
P 		31
C 55.4
(3)
P 		45.5
(0.1)
P 		51.8
(1.9)
P 		35.1
(-3)
P 		20
avr 55.7
(3) 		29.8
(-2.7) 		34.8
(-1.6) 		28.5
(-3) 		27

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 40
1 2 3 4 5 6 range
A 24.2
(-3)
A 		60.7
(3)
P 		28.1
(-2.4)
A 		31.5
(-1.8)
A 		33
(-1.6)
M 		26.4
(-2.6)
A 		37
B 55.7
(2.8)
P 		57
(3)
P 		30.2
(-1.4)
P 		20.8
(-3)
P 		42.6
(0.6)
P 		32.9
(-1)
P 		36
C 40
(1.5)
P 		44.1
(3)
P 		39.1
(1.2)
A 		32.9
(-1)
A 		34.9
(-0.3)
P 		27.4
(-3)
P 		17
avr 40
(-0.3) 		53.9
(3) 		32.5
(-2) 		28.4
(-3) 		36.8
(-1) 		28.9
(-2.9) 		26
NetAffx Links Cluster Members
Consensus/Exemplar
Group Members
GeneChip Array Information
Probe Set ID 190695_s_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.14000
Sequence Type Exemplar sequence
Representative Public ID T23F1.7A NCBI
Target Description T23F1.7A /REP_DB=WormBase Gene ID /WP=CE21195 /TR=O18119 /GB=CAB03411.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation /DEF=dipeptidyl peptidase IV
Cluster Evidence This cluster is supported by a Sanger Annotation.
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_074450(11), NM_074449(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_074450 NCBI Caenorhabditis elegans Dipeptidyl Peptidase Four (IV) family member (dpf-1) (dpf-1) mRNA, complete cds. 11/11 None
NM_074449 NCBI Caenorhabditis elegans Dipeptidyl Peptidase Four (IV) family member (dpf-1) (dpf-1) mRNA, complete cds. 11/11 None
SNAP00000033151 ENSEMBL cdna:SNAP chromosome:CEL140:V:15475408:15478590:1 11/11 None
GENEFINDER00000033155 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:15473959:15478586:1 11/11 None
T23F1.7a ENSEMBL cdna:known chromosome:CEL140:V:15473920:15478683:1 gene:T23F1.7 11/11 None
T23F1.7b ENSEMBL cdna:known chromosome:CEL140:V:15473959:15478590:1 gene:T23F1.7 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:15473958-15478590(+) 100.0 100.0
Public Domain and Genome References
Ensembl T23F1.7
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast CAB03411 Hypothetical protein T23F1.7a [Caenorhabditis elegans] ref|NP_506851.1| Dipeptidyl Peptidase Four (IV) family member (dpf-1) [Caenorhabditis elegans] 0.0
blast CAB03412 Hypothetical protein T23F1.7b [Caenorhabditis elegans] ref|NP_506850.1| Dipeptidyl Peptidase Four (IV) family member (dpf-1) [Caenorhabditis elegans] 0.0
blast CAE56836 Hypothetical protein CBG24661 [Caenorhabditis briggsae] 0.0
Protein Domains
Database ID Description E-Value
Pfam IPR001375 EMBL-EBI Peptidase S9, prolyl oligopeptidase active site region 1.8E-8
Pfam IPR002469 EMBL-EBI Peptidase S9B, dipeptidylpeptidase IV N-terminal 1.9E-22
Pfam IPR001375 EMBL-EBI Peptidase S9, prolyl oligopeptidase active site region 1.8E-8
Pfam IPR002469 EMBL-EBI Peptidase S9B, dipeptidylpeptidase IV N-terminal 1.9E-22
Pfam IPR001375 EMBL-EBI Peptidase S9, prolyl oligopeptidase active site region 1.8E-8
Pfam IPR002469 EMBL-EBI Peptidase S9B, dipeptidylpeptidase IV N-terminal 1.9E-22
Trans Membrane
ID Number Of Domains Domain Boundaries
NP_506851.1 1 31-53
NP_506850.1 1 31-53
T23F1.7a 1 31-53
T23F1.7b 1 31-53
GENEFINDER00000033155 1 31-53
Sequence
Target Sequence 
>C. ELEGANS:190695_S_AT
tcagcgtcacaagccgccattttaaggattgatggaagaggaagtggtggacgaggatgg
aagtatagatcagcaatttatgggcagttgggaacggtggaggtggaggatcagattaaa
gctatcaaagttgtcctccgtctctaccgtcacttattagatgctcgccgagttgccgtt
tttggctggtcctatggcggttttatgacgctctccatggtcaatgaagctccagagcag
ttcttcaagtgcgcagtttcagtggcgccagtcactaattttgcatattatgatgcaacc
tacactgaaagatatatgggtgatgcaccgttagagtcgtacagcgatgtgactaagaaa
ttggacaacttcaaatctacacgacttcttctgatgcatgggcttctggatgacaatgtg
cacttccaaaacagtgcaatcctaattgatgagctacaaaatcggggagtcgattttgac
ttgatggtctacccaaatcaagcgcattccctgtccagtcggacgtctcatgtcgttgga
aa

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TCAGCGTCACAAGCCGCCATTTTAA 74 625 1768 Antisense
ACCGTCACTTATTAGATGCTCGCCG 182 89 1913 Antisense
TGCCGTTTTTGGCTGGTCCTATGGC 67 585 1941 Antisense
TATGGCGGTTTTATGACGCTCTCCA 515 655 1960 Antisense
GACGCTCTCCATGGTCAATGAAGCT 373 381 1974 Antisense
AGTTCTTCAAGTGCGCAGTTTCAGT 184 63 2006 Antisense
GTGGCGCCAGTCACTAATTTTGCAT 145 493 2029 Antisense
GATGCACCGTTAGAGTCGTACAGCG 280 413 2089 Antisense
ACTTCAAATCTACACGACTTCTTCT 666 101 2135 Antisense
GACTTCTTCTGATGCATGGGCTTCT 404 371 2150 Antisense
GTCGGACGTCTCATGTCGTTGGAAA 105 471 2285 Antisense
Sequence Source Affymetrix Proprietary Database