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[189761_s_at] phosphotransferase /// ATP transferase

Description F32B5.1 /REP_DB=WormBase Gene ID /WP=CE28230 /TR=O01854 /GB=AAB54206.2 /SUBMIT=ST.LOUIS /CHR=1 /FEA=Sanger Annotation /DEF=phosphotransferase
Cluster 6grp_highest_10_10 > 25      6grp_high1_10_10 > 41      6grp_highest_nonorm > 16      6grp_total > 52      4grp_total > 59      6grp_highest_sub > 03      6grp_high1_sub > 03      6grp_total_sub > Hat      6grp_rule_based > S3      4grp_rule_based > L3      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 8001
1 2 3 4 range
A 5946
(1.3)
P 		7480.1
(2.5)
P 		8151.8
(3)
P 		154
(-3)
A 		7998
B 4748.3
(0.7)
P 		7635.8
(3)
P 		7397
(2.8)
P 		152.3
(-3)
A 		7484
C 5481.2
(1.1)
P 		7172.3
(2.4)
P 		7949.7
(3)
P 		151
(-3)
A 		7799
avr 5391.8
(1.1) 		7429.4
(2.7) 		7832.8
(3) 		152.4
(-3) 		7680

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 6642
1 2 3 4 5 6 range
A 5966.1
(-0.7)
P 		7469.5
(0.7)
P 		10014.3
(3)
P 		6935.1
(0.2)
P 		5212.6
(-1.3)
P 		3372.7
(-3)
P 		6642
B 5946.9
(-0.6)
P 		7423.9
(0.9)
P 		9549.6
(3)
P 		7071.8
(0.5)
P 		5783.6
(-0.8)
P 		3573.3
(-3)
P 		5976
C 6186
(-0.4)
P 		7223.7
(0.8)
P 		9343.3
(3)
P 		6785
(0.3)
P 		5781.4
(-0.8)
P 		3688.5
(-3)
P 		5655
avr 6033
(-0.5) 		7372.4
(0.8) 		9635.7
(3) 		6930.6
(0.3) 		5592.5
(-1) 		3544.8
(-3) 		6091
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 2748
1 2 3 4 range
A 2165
(3)
P 		1623.7
(1.5)
P 		2131
(2.9)
P 		22.5
(-3)
A 		2143
B 1514.2
(1.8)
P 		1885.9
(3)
P 		1714
(2.4)
P 		32.5
(-3)
A 		1853
C 1814.4
(0.9)
P 		2062.1
(1.5)
P 		2770.7
(3)
P 		25.5
(-3)
A 		2745
avr 1831.2
(2) 		1857.2
(2) 		2205.2
(3) 		26.8
(-3) 		2178

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 1835
1 2 3 4 5 6 range
A 1099.8
(-2.1)
P 		2656.5
(3)
P 		2180.9
(1.4)
P 		1758.9
(0.1)
P 		1572.9
(-0.5)
P 		821.2
(-3)
P 		1835
B 2069.2
(0.9)
P 		2471.1
(3)
P 		2318.9
(2.2)
P 		1873.1
(-0.2)
P 		2349.8
(2.4)
P 		1332.5
(-3)
P 		1139
C 2292.9
(2.6)
P 		2204.2
(2.1)
P 		2378
(3)
P 		1364.5
(-2.3)
P 		1870.8
(0.3)
P 		1234.8
(-3)
P 		1143
avr 1820.6
(0.2) 		2443.9
(3) 		2292.6
(2.3) 		1665.5
(-0.6) 		1931.2
(0.7) 		1129.5
(-3) 		1314
NetAffx Links Cluster Members
Consensus/Exemplar
Group Members
GeneChip Array Information
Probe Set ID 189761_s_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.103
Sequence Type Exemplar sequence
Representative Public ID F32B5.1 NCBI
Target Description F32B5.1 /REP_DB=WormBase Gene ID /WP=CE28230 /TR=O01854 /GB=AAB54206.2 /SUBMIT=ST.LOUIS /CHR=1 /FEA=Sanger Annotation /DEF=phosphotransferase
Cluster Evidence This cluster is supported by a Sanger Annotation.
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_058656(11), NM_058626(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_058656 NCBI Caenorhabditis elegans W10C8.5 (W10C8.5) mRNA, complete cds. 11/11 A 
NM_058626 NCBI Caenorhabditis elegans F32B5.1 (phosphotransferase) mRNA, complete cds. 11/11 A 
SNAP00000012336 ENSEMBL cdna:SNAP chromosome:CEL140:I:2854052:2855671:-1 11/11 None
GENEFINDER00000012338 ENSEMBL cdna:GeneFinder chromosome:CEL140:I:2854052:2855671:-1 11/11 None
F32B5.1 ENSEMBL cdna:known chromosome:CEL140:I:2700421:2702083:1 gene:F32B5.1 11/11 A 
W10C8.5.1 ENSEMBL cdna:known chromosome:CEL140:I:2853979:2855733:-1 gene:W10C8.5 11/11 None
W10C8.5.3 ENSEMBL cdna:known chromosome:CEL140:I:2853979:2855716:-1 gene:W10C8.5 11/11 None
W10C8.5.2 ENSEMBL cdna:known chromosome:CEL140:I:2853979:2855735:-1 gene:W10C8.5 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000013301 3/11 Cross Hyb Matching Probes None
GENEFINDER00000013332 3/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrI:2700420-2701792(+) 100.0 100.0
chrI:2854342-2855749(-) 97.6 97.6
Public Domain and Genome References
Gene Title phosphotransferase
ATP transferase
Ensembl F32B5.1
W10C8.5
Entrez Gene 171831 Entrez gene
171850 Entrez gene
SwissProt O01854 EMBL-EBI
O45011 EMBL-EBI
WormBase CE28230 Wormbase
CE18353 Wormbase
Functional Annotations
Ortholog
ID Title Organism
DROSOPHILA_2:1636098_AT dm
DROSGENOME1:148442_AT dm
DROSOPHILA_2:1636098_AT dm
DROSGENOME1:148442_AT dm
Gene Ontology
GO Molecular Function (view graph)
ID Description Evidence Links
16301 kinase activity inferred from electronic annotation QuickGO AmiGO
16772 transferase activity, transferring phosphorus-containing groups inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast NP_491057 W10C8.5 [Caenorhabditis elegans] gb|AAK21503.1| Hypothetical protein W10C8.5 [Caenorhabditis elegans] 0.0
blast AAB54206 Hypothetical protein F32B5.1 [Caenorhabditis elegans] ref|NP_491027.1| F32B5.1 [Caenorhabditis elegans] 0.0
blast CAE60596 Hypothetical protein CBG04232 [Caenorhabditis briggsae] 0.0
Protein Domains
Database ID Description E-Value
Pfam IPR000749 EMBL-EBI ATP:guanido phosphotransferase 7.7E-33
Pfam IPR000749 EMBL-EBI ATP:guanido phosphotransferase 1.0E-126
Pfam IPR000749 EMBL-EBI ATP:guanido phosphotransferase 1.5E-31
Pfam IPR000749 EMBL-EBI ATP:guanido phosphotransferase 1.0E-126
Trans Membrane
ID Number Of Domains Domain Boundaries
NP_491057.1 1 13-30
W10C8.5.1 1 13-30
W10C8.5.3 1 13-30
W10C8.5.2 1 13-30
SNAP00000012336 1 13-30
GENEFINDER00000012338 1 13-30
Sequence
Target Sequence 
>C. ELEGANS:189761_S_AT
tgaagcttacactttgttcgctccattgttcgacaagatcattgaggattatcacggatt
cagtccaaagcagaagcaaccaccagttgatcttggagagggaaagactaaggaattccc
accattggatccaaaaggaaagtacatcaagtcgacgagaatccgatgtggacgttcttt
gaagggatatccattcaatccatgtctcactcaggacaactatcttgagatggaaggaaa
ggtgaagaaggcgttctctgaatattcggacaaggaactcaagggcaagtactatccatt
ggatggtatgggcaaggatactcagaagcagctgattgctgatcatttcctgttcaagga
gggagatagacatcttcaatacgcaaatgcctgcaacttctggccaaagggacgtggtat
cttccacaataacgacaagactttcctgatttgggtgaacgaggaagatcatatgagaat
catttcaatgcaagaagggtctgatgtcggagctgtgcttgacagacttatcaagggagt
tcgcggaattgagaagcaggttccattctcccg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TGAAGCTTACACTTTGTTCGCTCCA 238 575 435 Antisense
GTTCGCTCCATTGTTCGACAAGATC 459 441 450 Antisense
AAGGAATTCCCACCATTGGATCCAA 312 161 544 Antisense
GAATCCGATGTGGACGTTCTTTGAA 442 329 593 Antisense
AATCCATGTCTCACTCAGGACAACT 676 167 631 Antisense
GAAGGCGTTCTCTGAATATTCGGAC 629 329 681 Antisense
GCAGCTGATTGCTGATCATTTCCTG 682 313 762 Antisense
ACGACAAGACTTTCCTGATTTGGGT 54 91 866 Antisense
GAAGGGTCTGATGTCGGAGCTGTGC 432 335 928 Antisense
GGAGCTGTGCTTGACAGACTTATCA 280 521 943 Antisense
TTGAGAAGCAGGTTCCATTCTCCCG 521 705 983 Antisense
Sequence Source Affymetrix Proprietary Database