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[188502_at]

Description T07H6.1 /REP_DB=WormBase Gene ID /WP=CE04911 /TR=Q22330 /GB=AAA96227.1 /SUBMIT=ST.LOUIS /CHR=X /FEA=Sanger Annotation /DEF=esterase
Cluster 6grp_total > 02      4grp_total > 58      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 95
1 2 3 4 range
A 120.7
(-2.8)
A 		208.2
(3)
A 		198.1
(2.3)
A 		118.1
(-3)
A 		90
B 146.2
(3)
A 		113
(-3)
A 		130.3
(0.1)
M 		114.3
(-2.8)
A 		33
C 163.4
(-0.2)
P 		185.1
(3)
P 		155.5
(-1.4)
P 		144.9
(-3)
A 		40
avr 143.4
(-0.5) 		168.8
(3) 		161.3
(2) 		125.8
(-3) 		43

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 140
1 2 3 4 5 6 range
A 153.1
(3)
A 		153
(3)
P 		130.2
(1.7)
M 		116.2
(0.9)
A 		142.3
(2.4)
A 		45.8
(-3)
A 		107
B 140.9
(0.5)
A 		185.4
(3)
A 		77.3
(-3)
P 		145.6
(0.8)
P 		143.3
(0.7)
M 		76.9
(-3)
P 		109
C 126.3
(0.7)
A 		153.5
(3)
P 		127.1
(0.8)
P 		83
(-3)
A 		106.3
(-1)
A 		107.6
(-0.9)
P 		71
avr 140.1
(1.4) 		164
(3) 		111.5
(-0.6) 		114.9
(-0.4) 		130.6
(0.7) 		76.8
(-3) 		87
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 37
1 2 3 4 range
A 44
(1.6)
A 		45.2
(1.9)
A 		51.8
(3)
A 		17.3
(-3)
A 		35
B 46.6
(3)
A 		27.9
(-2.1)
A 		30.2
(-1.4)
M 		24.4
(-3)
A 		22
C 54.1
(3)
P 		53.2
(2.8)
P 		54.2
(3)
P 		24.4
(-3)
A 		30
avr 48.2
(3) 		42.1
(1.6) 		45.4
(2.4) 		22
(-3) 		26

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 51
1 2 3 4 5 6 range
A 28.2
(-0.6)
A 		54.4
(3)
P 		28.4
(-0.6)
M 		29.5
(-0.5)
A 		42.9
(1.4)
A 		11.1
(-3)
A 		43
B 49
(1.2)
A 		61.7
(3)
A 		18.8
(-3)
P 		38.6
(-0.2)
P 		58.2
(2.5)
M 		28.7
(-1.6)
P 		43
C 46.8
(3)
A 		46.8
(3)
P 		32.3
(0.1)
P 		16.7
(-3)
A 		34.4
(0.5)
A 		36
(0.8)
P 		30
avr 41.3
(0.3) 		54.3
(3) 		26.5
(-2.8) 		28.3
(-2.4) 		45.2
(1.1) 		25.3
(-3) 		29
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 188502_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.17174
Sequence Type Exemplar sequence
Representative Public ID T07H6.1 NCBI
Target Description T07H6.1 /REP_DB=WormBase Gene ID /WP=CE04911 /TR=Q22330 /GB=AAA96227.1 /SUBMIT=ST.LOUIS /CHR=X /FEA=Sanger Annotation /DEF=esterase
Cluster Evidence This cluster is supported by a Sanger Annotation.
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_171704(10), NM_171705(9)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_171704 NCBI Caenorhabditis elegans T07H6.1a (esterase) mRNA, complete cds. 10/11 None
NM_171705 NCBI Caenorhabditis elegans T07H6.1b (esterase) mRNA, complete cds. 9/11 None
T07H6.1a ENSEMBL cdna:known chromosome:CEL140:X:6300096:6305103:1 gene:T07H6.1 10/11 A 
T07H6.1b ENSEMBL cdna:known chromosome:CEL140:X:6303955:6304993:1 gene:T07H6.1 9/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000029180 1/11 Cross Hyb Matching Probes None
SNAP00000003220 6/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrX:6300095-6304639(+) 100.0 100.0
Public Domain and Genome References
Ensembl T07H6.1
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast AAK77632 Hypothetical protein T07H6.1a [Caenorhabditis elegans] ref|NP_741812.1| T07H6.1a [Caenorhabditis elegans] 0.0
blast CAE61234 Hypothetical protein CBG05033 [Caenorhabditis briggsae] 0.0
blast T16835 hypothetical protein T07H6.1 - Caenorhabditis elegans 1.0E-129
blast AAM15599 Hypothetical protein T07H6.1b [Caenorhabditis elegans] ref|NP_741813.1| T07H6.1b [Caenorhabditis elegans] 2.0E-94
blast AAK77632 Hypothetical protein T07H6.1a [Caenorhabditis elegans] ref|NP_741812.1| T07H6.1a [Caenorhabditis elegans] 2.0E-94
Protein Domains
Database ID Description E-Value
Pfam IPR002018 EMBL-EBI Carboxylesterase, type B 1.3E-89
Pfam IPR002018 EMBL-EBI Carboxylesterase, type B 4.1E-7
Pfam IPR002018 EMBL-EBI Carboxylesterase, type B 3.2E-9
Pfam IPR002018 EMBL-EBI Carboxylesterase, type B 3.2E-9
Trans Membrane
ID Number Of Domains Domain Boundaries
NP_741812.1 1 659-681
NP_741813.1 1 140-162
T07H6.1a 1 659-681
T07H6.1b 1 140-162
Sequence
Target Sequence 
>C. ELEGANS:188502_AT
gtcaggtatctcgaaacccctaacaacgaattcatcgccgatcaagttgtaggagcattg
caaaaactcgaatctgacatcgagttcgttgctccgtgcgaaagagaagttgctgcttac
gtcgacaaaggtgtcccagtgtatctctactctttcgactacgtgcccaagagtccgatt
cttgaatcggaacggaaaatctactcgttgtttggaacgaaaccagttgagatgaagcga
accgagaaatctgaaatattggaaaaagctgcatttcatggtctcgatcacgcgttcatt
ttttcaaaaggatacagtagcaactttgaaatttccccgtatacgaagcgagaagaaaca
atgtcaaaaattctttgcacaatgctaacaaattttgtaaagaatggagatccttcaaca
acaaggttgagcataaaaccaaaacatgactcaaatcttcacaatttattcagattctct
tggccaatcttctccggcaatagca

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GTCAGGTATCTCGAAACCCCTAACA 132 465 871 Antisense
ACCCCTAACAACGAATTCATCGCCG 487 89 886 Antisense
TCTGACATCGAGTTCGTTGCTCCGT 562 607 943 Antisense
GAAGTTGCTGCTTACGTCGACAAAG 369 337 976 Antisense
GACAAAGGTGTCCCAGTGTATCTCT 173 365 994 Antisense
GACTACGTGCCCAAGAGTCCGATTC 183 315 1027 Antisense
AAAGCTGCATTTCATGGTCTCGATC 160 125 1135 Antisense
CTCGATCACGCGTTCATTTTTTCAA 296 233 1153 Antisense
TAGCAACTTTGAAATTTCCCCGTAT 169 643 1188 Antisense
ATTTATTCAGATTCTCTTGGCCAAT 489 15 1334 Antisense
TGGCCAATCTTCTCCGGCAATAGCA 668 543 1351 Antisense
Sequence Source Affymetrix Proprietary Database