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[188065_s_at]

Description K01C8.5 /REP_DB=WormBase Gene ID /WP=CE02266 /GEN=gei-14 /TR=Q21088 /GB=CAA88863.1 /SUBMIT=HINXTON /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_total > 76      4grp_total > 63      6grp_cgc > 58      6grp_cgc_sub > In      6grp_total_sub > Increase      6grp_rule_based > S6      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 54
1 2 3 4 range
A 38.6
(1)
A 		7.7
(-3)
A 		54.2
(3)
A 		29.1
(-0.2)
A 		47
B 32.4
(0)
A 		5.2
(-3)
A 		59.3
(3)
A 		11.1
(-2.3)
A 		54
C 19.8
(-1.8)
A 		13.5
(-3)
A 		44.8
(3)
A 		20.7
(-1.6)
A 		31
avr 30.3
(-0.1) 		8.8
(-3) 		52.8
(3) 		20.3
(-1.4) 		44

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 216
1 2 3 4 5 6 range
A 19.4
(-3)
A 		18.8
(-3)
A 		34.5
(-2.5)
A 		56.6
(-1.9)
A 		75.2
(-1.4)
P 		227.6
(3)
P 		209
B 28.7
(-3)
A 		30.1
(-2.9)
A 		56.2
(-2)
A 		104.9
(-0.1)
P 		108.8
(0)
P 		186.9
(3)
P 		158
C 12.6
(-3)
A 		11.3
(-3)
A 		63.5
(-1.1)
P 		69.9
(-0.9)
A 		61
(-1.2)
P 		177.3
(3)
P 		166
avr 20.2
(-3) 		20.1
(-3) 		51.4
(-1.9) 		77.1
(-1.1) 		81.7
(-0.9) 		197.3
(3) 		177
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 14
1 2 3 4 range
A 14
(2.9)
A 		1.7
(-3)
A 		14.2
(3)
A 		4.3
(-1.8)
A 		13
B 10.3
(1.4)
A 		1.3
(-3)
A 		13.7
(3)
A 		2.4
(-2.5)
A 		12
C 6.6
(-1.5)
A 		3.9
(-2.8)
A 		15.6
(3)
A 		3.5
(-3)
A 		12
avr 10.3
(0.9) 		2.3
(-3) 		14.5
(3) 		3.4
(-2.5) 		12

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 66
1 2 3 4 5 6 range
A 3.6
(-3)
A 		6.7
(-2.6)
A 		7.5
(-2.5)
A 		14.4
(-1.7)
A 		22.7
(-0.8)
P 		55.4
(3)
P 		52
B 10
(-3)
A 		10
(-3)
A 		13.7
(-2.6)
A 		27.8
(-1.2)
P 		44.2
(0.4)
P 		69.7
(3)
P 		60
C 4.7
(-2.9)
A 		3.4
(-3)
A 		16.2
(-1.6)
P 		14.1
(-1.9)
A 		19.7
(-1.3)
P 		59.3
(3)
P 		56
avr 6.1
(-3) 		6.7
(-2.9) 		12.5
(-2.3) 		18.8
(-1.6) 		28.9
(-0.5) 		61.5
(3) 		55
NetAffx Links Cluster Members
Consensus/Exemplar
Group Members
GeneChip Array Information
Probe Set ID 188065_s_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.3099
Sequence Type Exemplar sequence
Representative Public ID K01C8.5 NCBI
Target Description K01C8.5 /REP_DB=WormBase Gene ID /WP=CE02266 /GEN=gei-14 /TR=Q21088 /GB=CAA88863.1 /SUBMIT=HINXTON /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_063344(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_063344 NCBI Caenorhabditis elegans GEX Interacting protein family member (gei-14) (gei-14) mRNA, complete cds. 11/11 None
SNAP00000019057 ENSEMBL cdna:SNAP chromosome:CEL140:II:8270666:8275942:-1 11/11 None
GENEFINDER00000019070 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:8273587:8275942:-1 11/11 None
K01C8.5 ENSEMBL cdna:known chromosome:CEL140:II:8273526:8275944:-1 gene:K01C8.5 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:8273583-8275524(-) 100.0 100.0
Public Domain and Genome References
Gene Title
Gene Symbol gei-14
Ensembl K01C8.5
Entrez Gene 174328 Entrez gene
SwissProt Q21088 EMBL-EBI
WormBase CE35891 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast CAA88863 Hypothetical protein K01C8.5 [Caenorhabditis elegans] ref|NP_495745.2| GEX Interacting protein family member (gei-14) [Caenorhabditis elegans] 0.0
blast CAE57675 Hypothetical protein CBG00669 [Caenorhabditis briggsae] 3.0E-91
blast CAE57675 Hypothetical protein CBG00669 [Caenorhabditis briggsae] 2.0E-80
Sequence
Target Sequence 
>C. ELEGANS:188065_S_AT
ttgattccaccgccattattcagatcttctccaatcagcgaagatgtctttaaatccagt
gatcgaatcactatgccaagcactatcaaaggtccggaatcaacggccgttggaaatcgt
atcagttcagatggagaagaggaagattttgcaacaaagcagttcgacattgatgattat
atagcacgcggagcatcgaaaattgatttttccaaaacaatcactgctccaaatacaagt
tttcaagagccttcaacttcactattcaaggatccaacattcttccgccaagaatcgaaa
ggaaacgagatgaatattgaatcattctctgaaaggactccttcaaaaaatagaacttcg
caacagatggagtttcagatatcaacatcttctatttcgaaaacaaaaactaatgcctca
ctcgactccattcatagaaggaagtctaaaccccaaccaatgctggagttcgacgcggag
acgca

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TTGATTCCACCGCCATTATTCAGAT 418 689 1219 Antisense
ATTCAGATCTTCTCCAATCAGCGAA 467 11 1236 Antisense
GATCGAATCACTATGCCAAGCACTA 397 417 1279 Antisense
GCCAAGCACTATCAAAGGTCCGGAA 232 273 1293 Antisense
CGGCCGTTGGAAATCGTATCAGTTC 108 223 1322 Antisense
ATTATATAGCACGCGGAGCATCGAA 379 13 1394 Antisense
TTTTCCAAAACAATCACTGCTCCAA 67 679 1426 Antisense
TTCAAGGATCCAACATTCTTCCGCC 513 685 1483 Antisense
AATCATTCTCTGAAAGGACTCCTTC 328 171 1538 Antisense
GTCTAAACCCCAACCAATGCTGGAG 98 467 1662 Antisense
TGCTGGAGTTCGACGCGGAGACGCA 98 579 1679 Antisense
Sequence Source Affymetrix Proprietary Database