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[187148_at]

Description Y97E10B.6 /REP_DB=WormBase Gene ID /WP=CE26326 /TR=Q9N2U3 /GB=AAF60919.2 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 36      4grp_total > 12      6grp_cgc > 04      6grp_cgc_sub > Cu      6grp_total_sub > Cup      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 102
1 2 3 4 range
A 14.6
(-2.2)
A 		32.8
(-1)
A 		2.1
(-3)
A 		94.3
(3)
A 		92
B 32.6
(-0.6)
A 		18.6
(-3)
A 		19.9
(-2.8)
A 		52.9
(3)
A 		34
C 34.2
(-1.1)
A 		8.6
(-2.6)
A 		1.4
(-3)
A 		103.2
(3)
A 		102
avr 27.1
(-1.5) 		20
(-2) 		7.8
(-3) 		83.5
(3) 		76

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 30
1 2 3 4 5 6 range
A 4
(-2.4)
A 		22.1
(2.8)
A 		12.1
(-0.1)
A 		3.1
(-2.7)
A 		22.9
(3)
A 		2
(-3)
A 		21
B 31.9
(3)
A 		19.2
(0.4)
A 		4.4
(-2.6)
A 		2.5
(-3)
A 		2.9
(-2.9)
A 		20.3
(0.6)
A 		29
C 18.8
(3)
A 		16.9
(2.3)
A 		5.9
(-1.8)
A 		8.1
(-1)
A 		2.8
(-3)
A 		18.6
(2.9)
A 		16
avr 18.2
(2.5) 		19.4
(3) 		7.5
(-1.8) 		4.6
(-3) 		9.5
(-1) 		13.6
(0.6) 		15
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 17
1 2 3 4 range
A 5.3
(-0.9)
A 		7.1
(-0)
A 		0.6
(-3)
A 		13.8
(3)
A 		13
B 10.4
(2.2)
A 		4.6
(-3)
A 		4.6
(-3)
A 		11.3
(3)
A 		7
C 11.3
(0.8)
A 		2.5
(-2.3)
A 		0.5
(-3)
A 		17.4
(3)
A 		17
avr 9
(0.5) 		4.7
(-1.6) 		1.9
(-3) 		14.2
(3) 		12

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 11
1 2 3 4 5 6 range
A 0.7
(-2.8)
A 		7.9
(3)
A 		2.6
(-1.3)
A 		0.8
(-2.8)
A 		6.9
(2.2)
A 		0.5
(-3)
A 		7
B 11.1
(3)
A 		6.4
(0.3)
A 		1.1
(-2.8)
A 		0.7
(-3)
A 		1.2
(-2.7)
A 		7.6
(1)
A 		10
C 7
(3)
A 		5.2
(1.2)
A 		1.5
(-2.4)
A 		1.6
(-2.3)
A 		0.9
(-3)
A 		6.2
(2.2)
A 		6
avr 6.3
(2.8) 		6.5
(3) 		1.7
(-2.2) 		1
(-3) 		3
(-0.8) 		4.8
(1.1) 		6
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 187148_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.11458
Sequence Type Exemplar sequence
Representative Public ID Y97E10B.6 NCBI
Target Description Y97E10B.6 /REP_DB=WormBase Gene ID /WP=CE26326 /TR=Q9N2U3 /GB=AAF60919.2 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
Y97E10B.6 ENSEMBL cdna:pseudogene chromosome:CEL140:V:7917011:7918319:-1 gene:Y97E10B.6 9/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:7917011-7918320(-) 100.0 100.0
Public Domain and Genome References
Ensembl Y97E10B.6
Sequence
Target Sequence 
>C. ELEGANS:187148_AT
tgactcaccatacgcttttggaccttggttaatgtcaaacatatctcacttctcgtggaa
taacactgtttttattatgattgtgatggctctgaaccgattggttatcgtaggcttatt
ttttgttttggtaatcttggatcatacaaaatatggtttttggtctataacacctttaaa
ggagtataactggggatttttaattagcacagttgttcatagtacttgttttgttttaac
aattggatgttattttgccatatttatgaagatcaaaatttcaagcatcatcattaagat
atccgttaattccgaacatgctcgcaaaatccgtgcacgcgaagtttcgatattaattca
gtttttttcggtttcaatgttttcattattgagctttgcgtcatttaagattgttccaat
cttatttgataacatcgaaagtaatatcatttgtccaatttgctatgctttgcattgttg
tgccgacgcatgcatatacttatttt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TGACTCACCATACGCTTTTGGACCT 226 565 195 Antisense
GTCAAACATATCTCACTTCTCGTGG 97 465 228 Antisense
GTGATGGCTCTGAACCGATTGGTTA 84 485 277 Antisense
GATTGGTTATCGTAGGCTTATTTTT 17 435 293 Antisense
AGCACAGTTGTTCATAGTACTTGTT 404 75 400 Antisense
GAACATGCTCGCAAAATCCGTGCAC 374 351 508 Antisense
AAATCCGTGCACGCGAAGTTTCGAT 683 115 521 Antisense
TCATTATTGAGCTTTGCGTCATTTA 655 617 577 Antisense
ATTTGTCCAATTTGCTATGCTTTGC 97 19 643 Antisense
TGCTTTGCATTGTTGTGCCGACGCA 709 579 660 Antisense
GCCGACGCATGCATATACTTATTTT 448 283 676 Antisense
Sequence Source Affymetrix Proprietary Database