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[187137_at]

Description W10G11.14 /REP_DB=WormBase Gene ID /WP=CE14826 /TR=O44913 /GB=AAG24221.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_total > 93      4grp_total > 28      6grp_total_sub > Hat      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 34
1 2 3 4 range
A 20.5
(-1.6)
A 		19
(-1.9)
A 		13.8
(-3)
A 		42.8
(3)
A 		29
B 12.8
(-1.5)
A 		25.3
(3)
A 		8.6
(-3)
A 		15.8
(-0.4)
A 		17
C 18
(1.6)
A 		19
(3)
A 		14.6
(-3)
A 		17.9
(1.5)
A 		4
avr 17.1
(-0.8) 		21.1
(1) 		12.3
(-3) 		25.5
(3) 		13

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 49
1 2 3 4 5 6 range
A 34.5
(0.7)
A 		33
(0.5)
A 		24.5
(-0.8)
A 		10.6
(-3)
A 		48.9
(3)
A 		12.1
(-2.8)
A 		38
B 12.7
(-2.4)
A 		11.5
(-2.6)
A 		13.2
(-2.4)
A 		12.1
(-2.5)
A 		57
(3)
A 		8.2
(-3)
A 		49
C 9.6
(-3)
A 		10.5
(-2.7)
A 		10.4
(-2.7)
A 		28.3
(3)
A 		11.2
(-2.5)
A 		15.7
(-1)
A 		19
avr 18.9
(-1.5) 		18.3
(-1.6) 		16
(-2.1) 		17
(-1.9) 		39
(3) 		12
(-3) 		27
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 6
1 2 3 4 range
A 7.5
(3)
A 		4.1
(-2.2)
A 		3.6
(-3)
A 		6.3
(1.2)
A 		4
B 4.1
(-0)
A 		6.2
(3)
A 		2
(-3)
A 		3.4
(-1)
A 		4
C 6
(3)
A 		5.5
(2)
A 		5.1
(1.2)
A 		3
(-3)
A 		3
avr 5.9
(3) 		5.3
(1.4) 		3.6
(-3) 		4.2
(-1.4) 		2

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 21
1 2 3 4 5 6 range
A 6.4
(-1.2)
A 		11.7
(1.5)
A 		5.3
(-1.7)
A 		2.7
(-3)
A 		14.8
(3)
A 		3
(-2.9)
A 		12
B 4.4
(-2.6)
A 		3.8
(-2.8)
A 		3.2
(-3)
A 		3.2
(-3)
A 		23.1
(3)
A 		3.1
(-3)
A 		20
C 3.6
(-1.1)
A 		3.2
(-1.8)
A 		2.6
(-3)
A 		5.7
(3)
A 		3.6
(-1.1)
A 		5.3
(2.2)
A 		3
avr 4.8
(-2.3) 		6.2
(-1.5) 		3.7
(-3) 		3.9
(-2.9) 		13.8
(3) 		3.8
(-2.9) 		10
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 187137_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.4265
Sequence Type Exemplar sequence
Representative Public ID W10G11.14 NCBI
Target Description W10G11.14 /REP_DB=WormBase Gene ID /WP=CE14826 /TR=O44913 /GB=AAG24221.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_062182(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_062182 NCBI Caenorhabditis elegans W10G11.14 (W10G11.14) mRNA, complete cds. 11/11 None
SNAP00000013264 ENSEMBL cdna:SNAP chromosome:CEL140:II:3573550:3574646:1 11/11 None
GENEFINDER00000013279 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:3573550:3574646:1 11/11 None
W10G11.14 ENSEMBL cdna:known chromosome:CEL140:II:3573550:3574646:1 gene:W10G11.14 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:3573548-3574645(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl W10G11.14
Entrez Gene 173705 Entrez gene
SwissProt O44913 EMBL-EBI
WormBase CE14826 Wormbase
Functional Annotations
Gene Ontology
GO Molecular Function (view graph)
ID Description Evidence Links
5529 sugar binding inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast AAG24221 Hypothetical protein W10G11.14 [Caenorhabditis elegans] ref|NP_494583.1| W10G11.14 [Caenorhabditis elegans] 1.0E-121
blast AAG24210 Hypothetical protein W10G11.15 [Caenorhabditis elegans] ref|NP_494582.1| W10G11.15 [Caenorhabditis elegans] 1.0E-86
blast AAG24220 Hypothetical protein W10G11.13 [Caenorhabditis elegans] ref|NP_494585.1| W10G11.13 [Caenorhabditis elegans] 5.0E-76
Sequence
Target Sequence 
>C. ELEGANS:187137_AT
gggttcaacttttgctgattgcccagcagcatggaagacgatcttaaactcccaatacaa
ggagagtgaggacaatggatgtgagcctggttggaagttctttaatcggccttctggagg
atggtgcatgagagtattcgctgggttcaacgcaaaaaaagctgacgctgaaaagtcttg
tcaagccgtaggatcgacactttctggaattcagaacaagaatgaggcattgtatattca
aactgctctcctcgctcaaatcccacaatccagtggctcagtatggatcggaatccaaag
aacccaaaaatgcctgaaacaaaaactcactgctgcctgctcagccctcaccgcctttga
gtacaccgacaaatcggtaaccggcaccgatggattcgtcttccagaaatatcaacctga
taactcacaattaaaccagaactgtgcacttcttctagcttcaaaaaccccgactatcct
gaatgaccaatattttgcagcgacgttggacgatacaaattgcgatggaatgctcgaagg
tgatgcggcacgcgttctt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GGGTTCAACTTTTGCTGATTGCCCA 309 497 51 Antisense
GAAGACGATCTTAAACTCCCAATAC 560 339 84 Antisense
GTTCTTTAATCGGCCTTCTGGAGGA 291 443 147 Antisense
GAGAGTATTCGCTGGGTTCAACGCA 249 395 180 Antisense
CAAGCCGTAGGATCGACACTTTCTG 286 187 232 Antisense
AAATCCCACAATCCAGTGGCTCAGT 105 119 308 Antisense
GAAACAAAAACTCACTGCTGCCTGC 5 357 366 Antisense
ACCGCCTTTGAGTACACCGACAAAT 687 87 400 Antisense
GCACTTCTTCTAGCTTCAAAAACCC 656 313 496 Antisense
CAAAAACCCCGACTATCCTGAATGA 515 189 512 Antisense
CGAAGGTGATGCGGCACGCGTTCTT 146 253 585 Antisense
Sequence Source Affymetrix Proprietary Database