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[186917_at]

Description W10G11.15 /REP_DB=WormBase Gene ID /WP=CE14828 /TR=O44914 /GB=AAG24210.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_total > 34      4grp_total > 34      6grp_total_sub > Decrease      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 62
1 2 3 4 range
A 31.6
(-3)
A 		92.1
(3)
A 		43.1
(-1.9)
A 		52.7
(-0.9)
A 		61
B 41.9
(-0.1)
A 		30.2
(-3)
A 		51.5
(2.2)
A 		54.6
(3)
A 		24
C 43.2
(-2.1)
A 		61.7
(3)
A 		39.8
(-3)
A 		47.5
(-0.9)
A 		22
avr 38.9
(-3) 		61.3
(3) 		44.8
(-1.4) 		51.6
(0.4) 		22

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 42
1 2 3 4 5 6 range
A 41.6
(3)
A 		29.4
(-0.1)
A 		18.1
(-3)
A 		31.1
(0.3)
A 		28.2
(-0.4)
A 		28.3
(-0.4)
A 		24
B 28.5
(0.9)
A 		42.6
(3)
A 		31.8
(1.4)
A 		15.6
(-1.1)
A 		24
(0.2)
A 		3.2
(-3)
A 		39
C 30.4
(0.9)
A 		20.9
(-0.5)
A 		45.3
(3)
A 		3.3
(-3)
A 		3.3
(-3)
A 		15.1
(-1.3)
A 		42
avr 33.5
(3) 		31
(2.2) 		31.7
(2.4) 		16.7
(-2.6) 		18.5
(-2) 		15.5
(-3) 		18
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 13
1 2 3 4 range
A 11.5
(-1.1)
A 		20
(3)
A 		11.3
(-1.2)
A 		7.7
(-3)
A 		12
B 13.4
(3)
A 		7.5
(-3)
A 		11.9
(1.5)
A 		11.6
(1.2)
A 		6
C 14.3
(0.9)
A 		17.7
(3)
A 		13.9
(0.6)
A 		8
(-3)
A 		10
avr 13.1
(1) 		15.1
(3) 		12.4
(0.3) 		9.1
(-3) 		6

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 14
1 2 3 4 5 6 range
A 7.7
(0.5)
A 		10.5
(3)
A 		3.9
(-3)
A 		7.9
(0.6)
A 		8.5
(1.2)
A 		6.9
(-0.3)
A 		7
B 9.9
(1)
A 		14.2
(3)
A 		7.7
(0)
A 		4.1
(-1.7)
A 		9.8
(1)
A 		1.2
(-3)
A 		13
C 11.3
(2.9)
A 		6.4
(0.2)
A 		11.5
(3)
A 		0.7
(-3)
A 		1.1
(-2.8)
A 		5.1
(-0.6)
A 		11
avr 9.6
(2.2) 		10.4
(3) 		7.7
(0.4) 		4.2
(-3) 		6.5
(-0.8) 		4.4
(-2.8) 		6
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 186917_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.4077
Sequence Type Exemplar sequence
Representative Public ID W10G11.15 NCBI
Target Description W10G11.15 /REP_DB=WormBase Gene ID /WP=CE14828 /TR=O44914 /GB=AAG24210.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_062181(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_062181 NCBI Caenorhabditis elegans W10G11.15 (W10G11.15) mRNA, complete cds. 11/11 None
SNAP00000013263 ENSEMBL cdna:SNAP chromosome:CEL140:II:3571485:3572877:1 11/11 None
GENEFINDER00000013277 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:3571485:3572877:1 11/11 None
W10G11.15 ENSEMBL cdna:known chromosome:CEL140:II:3571485:3572877:1 gene:W10G11.15 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:3571483-3572876(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl W10G11.15
Entrez Gene 189343 Entrez gene
SwissProt O44914 EMBL-EBI
WormBase CE14828 Wormbase
Functional Annotations
Gene Ontology
GO Molecular Function (view graph)
ID Description Evidence Links
5529 sugar binding inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast AAG24210 Hypothetical protein W10G11.15 [Caenorhabditis elegans] ref|NP_494582.1| W10G11.15 [Caenorhabditis elegans] 1.0E-113
blast AAG24221 Hypothetical protein W10G11.14 [Caenorhabditis elegans] ref|NP_494583.1| W10G11.14 [Caenorhabditis elegans] 2.0E-82
blast AAG24220 Hypothetical protein W10G11.13 [Caenorhabditis elegans] ref|NP_494585.1| W10G11.13 [Caenorhabditis elegans] 2.0E-68
Sequence
Target Sequence 
>C. ELEGANS:186917_AT
gtctagctctatcagctgctgactgtccagcagcatggaaagcaattttgaactcccagg
ccgaagagagtgaagataacggatgtgaagctggttggaagtttttcaatcggccatctg
gaggatggtgtatgagggtattcgaggggttcaatgcagcaaaaaccgacgccgaaaagt
cctgtaaatccgtgggctcaacactttctgggattcaaaacaggaacgaggcattgtata
ttcagactgccctcctcgcccaaatcgcaagatcaagtggctccgtctgggttggcatgc
agagaacccaaaaatgtctgaagcaaccaaaatcggacacctgttcagctctcacagctt
tcgagtacaccgacggatccgtgaccggtaccgacggattcatcttccagggcaatcaac
cagacaacaaggagttgaatcaggattgtgcagttctcctagcttccaaggcggcaagtg
tctcgactaatggccaattctatgcagccacgttggatgatatcatgtgcgatgaacagg
tcgatgacaacgggccacgt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GTCTAGCTCTATCAGCTGCTGACTG 49 467 47 Antisense
CAATTTTGAACTCCCAGGCCGAAGA 93 175 89 Antisense
AAGTCCTGTAAATCCGTGGGCTCAA 579 89 223 Antisense
GTGGGCTCAACACTTTCTGGGATTC 570 487 238 Antisense
CAAAATCGGACACCTGTTCAGCTCT 197 191 374 Antisense
CTCTCACAGCTTTCGAGTACACCGA 508 229 395 Antisense
TACACCGACGGATCCGTGACCGGTA 184 639 412 Antisense
GACCGGTACCGACGGATTCATCTTC 267 383 429 Antisense
TAGCTTCCAAGGCGGCAAGTGTCTC 202 649 506 Antisense
GTGTCTCGACTAATGGCCAATTCTA 597 485 524 Antisense
ACAGGTCGATGACAACGGGCCACGT 456 71 582 Antisense
Sequence Source Affymetrix Proprietary Database