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[186911_s_at]

Description Y51H7BR.2 /REP_DB=WormBase Gene ID /WP=CE22356 /TR=Q9N3J7 /GB=AAF60744.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_total > 77      4grp_total > 02      6grp_total_sub > Increase      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 58
1 2 3 4 range
A 2.1
(-2.7)
A 		3.6
(-0.6)
A 		1.9
(-3)
A 		6.2
(3)
A 		4
B 1.8
(-3)
A 		2.7
(-1)
A 		2.6
(-1.2)
A 		4.5
(3)
A 		3
C 3.6
(-2.8)
A 		1.7
(-3)
A 		2.8
(-2.9)
A 		60
(3)
A 		58
avr 2.5
(-3) 		2.7
(-2.9) 		2.4
(-3) 		23.6
(3) 		21

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 60
1 2 3 4 5 6 range
A 2.7
(-3)
A 		2.5
(-3)
A 		12.2
(-1.4)
A 		3.9
(-2.8)
A 		14.2
(-1.1)
A 		39.7
(3)
A 		37
B 9.9
(-2.2)
A 		1.5
(-3)
A 		1.9
(-3)
A 		26.2
(-0.5)
A 		5.9
(-2.6)
A 		61.4
(3)
P 		60
C 5
(-2.6)
A 		5.5
(-2.6)
A 		3
(-3)
A 		6.7
(-2.4)
A 		13.4
(-1.2)
A 		37.2
(3)
P 		34
avr 5.9
(-2.6) 		3.2
(-3) 		5.7
(-2.7) 		12.3
(-1.7) 		11.2
(-1.9) 		46.1
(3) 		43
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 10
1 2 3 4 range
A 0.8
(1.5)
A 		0.8
(1.5)
A 		0.5
(-3)
A 		0.9
(3)
A 		0
B 0.6
(-3)
A 		0.7
(-1.5)
A 		0.6
(-3)
A 		1
(3)
A 		0
C 1.2
(-2.6)
A 		0.5
(-3)
A 		1
(-2.7)
A 		10.1
(3)
A 		10
avr 0.9
(-2.6) 		0.7
(-3) 		0.7
(-3) 		4
(3) 		3

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 22
1 2 3 4 5 6 range
A 0.5
(-3)
A 		0.9
(-2.7)
A 		2.7
(-1.6)
A 		1
(-2.7)
A 		4.3
(-0.5)
A 		9.7
(3)
A 		9
B 3.4
(-2.2)
A 		0.5
(-3)
A 		0.5
(-3)
A 		7
(-1.3)
A 		2.4
(-2.5)
A 		22.9
(3)
P 		22
C 1.8
(-2.5)
A 		1.7
(-2.5)
A 		0.8
(-3)
A 		1.3
(-2.7)
A 		4.3
(-1.2)
A 		12.5
(3)
P 		12
avr 1.9
(-2.6) 		1
(-3) 		1.3
(-2.9) 		3.1
(-2.1) 		3.7
(-1.8) 		15
(3) 		14
NetAffx Links Cluster Members
Consensus/Exemplar
Group Members
GeneChip Array Information
Probe Set ID 186911_s_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.5634
Sequence Type Exemplar sequence
Representative Public ID Y51H7BR.2 NCBI
Target Description Y51H7BR.2 /REP_DB=WormBase Gene ID /WP=CE22356 /TR=Q9N3J7 /GB=AAF60744.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_061590(11), NM_061588(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_061590 NCBI Caenorhabditis elegans K05F6.5 (K05F6.5) mRNA, complete cds. 11/11 A 
NM_061588 NCBI Caenorhabditis elegans Y51H7BR.2 (Y51H7BR.2) mRNA, complete cds. 11/11 A 
SNAP00000019312 ENSEMBL cdna:SNAP chromosome:CEL140:II:1539190:1539888:1 11/11 None
GENEFINDER00000019331 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:1538897:1540691:1 11/11 None
SNAP00000028991 ENSEMBL cdna:SNAP chromosome:CEL140:II:1536544:1537281:1 11/11 None
Y51H7BR.2 ENSEMBL cdna:known chromosome:CEL140:II:1536265:1537281:1 gene:Y51H7BR.2 11/11 A 
K05F6.5 ENSEMBL cdna:known chromosome:CEL140:II:1538897:1542724:1 gene:K05F6.5 11/11 A 
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
GENEFINDER00000028996 5/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:1536263-1537280(+) 100.0 100.0
Public Domain and Genome References
Gene Title

Ensembl Y51H7BR.2
K05F6.5
Entrez Gene 173528 Entrez gene
187035 Entrez gene
SwissProt O44861 EMBL-EBI
Q9N3J7 EMBL-EBI
WormBase CE17163 Wormbase
CE22356 Wormbase
Functional Annotations
Ortholog
ID Title Organism
CANINE:1582432_AT paraoxonase 2 cfa
CANINE:1582431_AT paraoxonase 2 cfa
CANINE_2:CFA.15057.1.A1_AT paraoxonase 2 cfa
CANINE_2:CFAAFFX.4088.1.S1_S_AT paraoxonase 2 cfa
CHICKEN:GGA.2475.1.S1_AT paraoxonase 2 gga
HG-FOCUS:201876_AT paraoxonase 2 hs
HG-U133A:201876_AT paraoxonase 2 hs
HG-U133_PLUS_2:201876_AT paraoxonase 2 hs
HG-U133A_2:201876_AT paraoxonase 2 hs
HG-U133_PLUS_2:210830_S_AT paraoxonase 2 hs
HG-U133A:210830_S_AT paraoxonase 2 hs
HG-U133A_2:210830_S_AT paraoxonase 2 hs
HUGENEFL:L48513_AT paraoxonase 2 hs
U133_X3P:G4505952_3P_AT paraoxonase 2 hs
U133_X3P:G2228776_3P_A_AT paraoxonase 2 hs
U133_X3P:HS.165598.0.A1_3P_AT paraoxonase 2 hs
HG-U133_PLUS_2:242700_AT paraoxonase 2 hs
HG-U133B:242700_AT paraoxonase 2 hs
HG-U95AV2:40504_AT paraoxonase 2 hs
HG-U95B:59415_AT paraoxonase 2 hs
HG-U133_PLUS_2:236882_AT Paraoxonase 2 hs
HG-U133B:236882_AT Paraoxonase 2 hs
HG-U95B:55256_AT Paraoxonase 2 hs
HG-U95C:66076_AT Paraoxonase 2 hs
HG-U95D:82338_AT Paraoxonase 2 hs
HG-U95D:87526_AT Paraoxonase 2 hs
HU35KSUBC:RC_W73883_AT Paraoxonase 2 hs
U133_X3P:HS.58174.0.A1_3P_AT Paraoxonase 2 hs
MOUSE430_2:1425791_AT paraoxonase 2 mm
MOE430A:1425791_AT paraoxonase 2 mm
MOUSE430A_2:1425791_AT paraoxonase 2 mm
MOUSE430_2:1450686_AT paraoxonase 2 mm
MOE430A:1450686_AT paraoxonase 2 mm
MOUSE430A_2:1450686_AT paraoxonase 2 mm
MOE430B:1429020_AT paraoxonase 2 mm
MOUSE430_2:1429020_AT paraoxonase 2 mm
MU11KSUBB:MSA.2121.0_F_AT paraoxonase 2 mm
MG-U74AV2:104378_AT paraoxonase 2 mm
MOE430B:1429019_S_AT paraoxonase 2 mm
MOUSE430_2:1429019_S_AT paraoxonase 2 mm
MU19KSUBC:TC36692_F_AT Paraoxonase 2, mRNA (cDNA clone MGC:46933 IMAGE:5027719) mm
MU19KSUBC:TC37551_AT Paraoxonase 2, mRNA (cDNA clone MGC:46933 IMAGE:5027719) mm
RG-U34C:RC_AI169105_AT paraoxonase 2 (predicted) rn
RAE230A:1375848_AT paraoxonase 2 (predicted) rn
RAT230_2:1375848_AT paraoxonase 2 (predicted) rn
Gene Ontology
GO Molecular Function (view graph)
ID Description Evidence Links
4064 arylesterase activity inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast AAB95025 Hypothetical protein K05F6.5 [Caenorhabditis elegans] ref|NP_493991.1| K05F6.5 [Caenorhabditis elegans] 0.0
blast AAK85465 Hypothetical protein E01A2.8 [Caenorhabditis elegans] ref|NP_491307.1| E01A2.8 [Caenorhabditis elegans] 0.0
blast AAF60744 Hypothetical protein Y51H7BR.2 [Caenorhabditis elegans] ref|NP_493989.1| Y51H7BR.2 [Caenorhabditis elegans] 0.0
blast CAE66713 Hypothetical protein CBG12059 [Caenorhabditis briggsae] 1.0E-160
blast AAF60744 Hypothetical protein Y51H7BR.2 [Caenorhabditis elegans] ref|NP_493989.1| Y51H7BR.2 [Caenorhabditis elegans] 1.0E-138
Protein Domains
Database ID Description E-Value
Pfam IPR001810 EMBL-EBI Cyclin-like F-box 5.6E-7
Pfam IPR002640 EMBL-EBI Arylesterase 1.0E-126
Pfam IPR001810 EMBL-EBI Cyclin-like F-box 2.5E-7
Sequence
Target Sequence 
>C. ELEGANS:186911_S_AT
tctccgcatttctaccaataaaaaccttcggttttaatcacactgtccaatataactcct
ctcaactctctgcactacggccagctttgccaaaaaaattagaatctatctatgcagata
tcagcattccattaaacgagctactgctcacatgctccagaacccttcaaattgtcgaat
cactattaacggataaggatattaatttgtttctgaaacattggatggccggattgaaac
cagaacttgaatatttgtatattcgaaagaatggagctgcttacaatccaaa

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TCTCCGCATTTCTACCAATAAAAAC 151 611 485 Antisense
GCATTTCTACCAATAAAAACCTTCG 76 309 490 Antisense
CCTTCGGTTTTAATCACACTGTCCA 550 269 509 Antisense
TCACACTGTCCAATATAACTCCTCT 160 629 522 Antisense
GAATCTATCTATGCAGATATCAGCA 75 329 586 Antisense
GCAGATATCAGCATTCCATTAAACG 518 311 598 Antisense
CATTCCATTAAACGAGCTACTGCTC 497 217 609 Antisense
AAACGAGCTACTGCTCACATGCTCC 330 127 618 Antisense
CATGCTCCAGAACCCTTCAAATTGT 396 211 635 Antisense
GCTCCAGAACCCTTCAAATTGTCGA 429 297 638 Antisense
AGAATGGAGCTGCTTACAATCCAAA 417 73 752 Antisense
Sequence Source Affymetrix Proprietary Database