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[186653_at]

Description F45C12.14 /REP_DB=WormBase Gene ID /WP=CE10462 /TR=O16743 /GB=AAB66212.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_total > 43      4grp_total > 04      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 55
1 2 3 4 range
A 46.7
(3)
A 		3.7
(-3)
A 		10.1
(-2.1)
A 		39.3
(2)
A 		43
B 26
(1.6)
A 		16
(-3)
A 		29.1
(3)
A 		24.7
(1)
A 		13
C 3.2
(-3)
A 		40
(1)
A 		21.5
(-1)
A 		57.9
(3)
A 		55
avr 25.3
(-1.4) 		19.9
(-3) 		20.2
(-2.9) 		40.6
(3) 		21

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 70
1 2 3 4 5 6 range
A 15.5
(-2)
A 		6.1
(-2.8)
A 		72.5
(3)
A 		17.5
(-1.8)
A 		8.5
(-2.6)
A 		4.1
(-3)
A 		68
B 31.2
(3)
A 		27
(2.1)
A 		3
(-3)
A 		7.9
(-2)
A 		7.6
(-2)
A 		23.3
(1.3)
A 		28
C 4.3
(-2.4)
A 		10.5
(0.1)
A 		4.7
(-2.2)
A 		3
(-2.9)
A 		18
(3)
A 		2.7
(-3)
A 		15
avr 17
(-0.4) 		14.5
(-1.3) 		26.7
(3) 		9.5
(-3) 		11.4
(-2.3) 		10
(-2.8) 		17
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 16
1 2 3 4 range
A 17
(3)
A 		0.8
(-3)
A 		2.6
(-2.3)
A 		5.8
(-1.1)
A 		16
B 8.3
(3)
A 		3.9
(-3)
A 		6.7
(0.8)
A 		5.3
(-1.1)
A 		4
C 1.1
(-3)
A 		11.5
(3)
A 		7.5
(0.7)
A 		9.8
(2)
A 		10
avr 8.8
(3) 		5.4
(-3) 		5.6
(-2.6) 		7
(-0.2) 		3

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 15
1 2 3 4 5 6 range
A 2.8
(-2.3)
A 		2.2
(-2.5)
A 		15.8
(3)
A 		4.4
(-1.6)
A 		2.6
(-2.4)
A 		1
(-3)
A 		15
B 10.9
(3)
A 		9
(1.9)
A 		0.7
(-3)
A 		2.1
(-2.2)
A 		3.1
(-1.6)
A 		8.7
(1.7)
A 		10
C 1.6
(-1.8)
A 		3.2
(0)
A 		1.2
(-2.3)
A 		0.6
(-3)
A 		5.8
(3)
A 		0.9
(-2.7)
A 		5
avr 5.1
(1.6) 		4.8
(1.1) 		5.9
(3) 		2.4
(-3) 		3.8
(-0.6) 		3.5
(-1.1) 		4
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 186653_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.4608
Sequence Type Exemplar sequence
Representative Public ID F45C12.14 NCBI
Target Description F45C12.14 /REP_DB=WormBase Gene ID /WP=CE10462 /TR=O16743 /GB=AAB66212.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Design Representative Id based pipeline to a Affymetrix Proprietary Database identifier using 1 transcript(s).
Annotation Grade This is a grade R annotation.
Annotation Transcript Cluster (# of Matching Probes) F45C12.14
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
F45C12.14 F45C12.14 /REP_DB=WormBase Gene ID /WP=CE10462 /TR=O16743 /GB=AAB66212.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
NM_061655 6/11 Cross Hyb Matching Probes None
GENEFINDER00000033207 6/11 Cross Hyb Matching Probes None
T07C12.4 2/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:1719495-1722419(-) 85.05 100.0
Public Domain and Genome References
Ensembl F45C12.14
Sequence
Target Sequence 
>C. ELEGANS:186653_AT
tttgccttaacgatattctttccataaacagtgaattcgtcagcgtacagaattacggtg
gcaaatttacagtaaaggacctaaacttgtacctgaagcactggataaatgggttgaacc
ataaaacaaggtacatcgaagttgcatcccttttgatcagtaaaatgagcagacccgcat
ttttcaaagctatcttctgtggtatcgagtacgcgaagacgcgggagtacgtcgaggcag
ccagatataaggattctcttataaagtatcatgggcaaagagagatgaccagaggattca
cgatcaatcggaagaatgggacaactgcatatgtctattttcatattactcatcccctgg
aattcgtggtattcctgcggatcacagcaagtcattcttttcggtccttggctatagtgg
accagggggtgatgacttctccgtctgcgtcacgagtggatatctcctttcgcagcgaat
cagtccatcgcatcggcggccttccaacaggccttttccatccatatgggcgccattctg
tcatcaacgttagttg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TTTGCCTTAACGATATTCTTTCCAT 493 669 665 Antisense
GAAGTTGCATCCCTTTTGATCAGTA 302 337 802 Antisense
CAGACCCGCATTTTTCAAAGCTATC 417 205 834 Antisense
AGCTATCTTCTGTGGTATCGAGTAC 461 77 852 Antisense
GACGCGGGAGTACGTCGAGGCAGCC 66 381 882 Antisense
TCTATTTTCATATTACTCATCCCCT 318 615 998 Antisense
TACTCATCCCCTGGAATTCGTGGTA 341 643 1011 Antisense
TGGACCAGGGGGTGATGACTTCTCC 273 549 1082 Antisense
GTCACGAGTGGATATCTCCTTTCGC 520 463 1113 Antisense
TCCATCCATATGGGCGCCATTCTGT 414 589 1181 Antisense
GCCATTCTGTCATCAACGTTAGTTG 600 279 1196 Antisense
Sequence Source Affymetrix Proprietary Database