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[186534_at]

Description Y116A8C.25 /REP_DB=WormBase Gene ID /WP=CE23333 /TR=Q9U2U7 /GB=CAB55130.1 /SUBMIT=HINXTON /CHR=4 /FEA=Sanger Annotation
Cluster 6grp_total > 74      4grp_total > 02      4grp_rule_based > L4      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 367
1 2 3 4 range
A 100.6
(-1.5)
A 		58.3
(-2.6)
A 		42.8
(-3)
A 		276.4
(3)
A 		234
B 46.1
(-2.7)
A 		34
(-3)
A 		45.9
(-2.7)
A 		294.3
(3)
P 		260
C 23.8
(-2.8)
A 		11.5
(-3)
A 		52.4
(-2.3)
A 		378.7
(3)
P 		367
avr 56.8
(-2.5) 		34.6
(-3) 		47
(-2.7) 		316.5
(3) 		282

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 113
1 2 3 4 5 6 range
A 16.4
(-3)
A 		42.4
(-1.6)
A 		129.8
(3)
A 		118.2
(2.4)
A 		77
(0.2)
A 		90
(0.9)
A 		113
B 89.4
(-0.1)
A 		93.4
(0.5)
A 		67.2
(-3)
A 		112.4
(3)
A 		70.1
(-2.6)
A 		91.9
(0.3)
A 		45
C 71
(-2.5)
A 		86.5
(-0.6)
A 		67.3
(-3)
A 		114.5
(2.8)
A 		115.8
(3)
A 		106.1
(1.8)
A 		49
avr 58.9
(-3) 		74.1
(-1.4) 		88.1
(0.1) 		115
(3) 		87.6
(0.1) 		96
(1) 		56
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 61
1 2 3 4 range
A 36.6
(2.2)
A 		12.6
(-2.7)
A 		11.2
(-3)
A 		40.5
(3)
A 		29
B 14.7
(-2.3)
A 		8.4
(-3)
A 		10.6
(-2.8)
A 		62.7
(3)
P 		54
C 7.9
(-2.5)
A 		3.3
(-3)
A 		18.3
(-1.5)
A 		63.8
(3)
P 		61
avr 19.7
(-1.5) 		8.1
(-3) 		13.4
(-2.3) 		55.7
(3) 		48

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 35
1 2 3 4 5 6 range
A 3
(-3)
A 		15.1
(-0.3)
A 		28.3
(2.6)
A 		30
(3)
A 		23.2
(1.5)
A 		21.9
(1.2)
A 		27
B 31.1
(1.9)
A 		31.1
(1.9)
A 		16.3
(-3)
A 		29.8
(1.5)
A 		28.5
(1.1)
A 		34.3
(3)
A 		18
C 26.3
(-0.3)
A 		26.4
(-0.3)
A 		17.1
(-3)
A 		23
(-1.3)
A 		37.5
(3)
A 		35.5
(2.4)
A 		20
avr 20.1
(-3) 		24.2
(-0.7) 		20.6
(-2.7) 		27.6
(1.3) 		29.7
(2.5) 		30.6
(3) 		11
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 186534_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.9741
Sequence Type Exemplar sequence
Representative Public ID Y116A8C.25 NCBI
Target Description Y116A8C.25 /REP_DB=WormBase Gene ID /WP=CE23333 /TR=Q9U2U7 /GB=CAB55130.1 /SUBMIT=HINXTON /CHR=4 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_070624(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_070624 NCBI Caenorhabditis elegans Y116A8C.25 (Y116A8C.25) mRNA, complete cds. 11/11 None
GENEFINDER00000004167 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:17074531:17078702:-1 11/11 None
Y116A8C.25 ENSEMBL cdna:known chromosome:CEL140:IV:17074531:17078702:-1 gene:Y116A8C.25 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000004098 5/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrIV:17074536-17078708(-) 96.32 100.0
Public Domain and Genome References
Gene Title
Ensembl Y116A8C.25
Entrez Gene 191003 Entrez gene
SwissProt Q9U2U7 EMBL-EBI
WormBase CE23333 Wormbase
Functional Annotations
Ortholog
ID Title Organism
ATH1-121501:251353_AT fructosamine kinase family protein at
CANINE_2:CFAAFFX.20172.1.S1_AT similar to fructosamine-3-kinase-related protein cfa
CHICKEN:GGAAFFX.1000.1.S1_AT similar to Hypothetical protein 9030012M21 gga
CHICKEN:GGAAFFX.24418.1.S1_AT similar to Hypothetical protein 9030012M21 gga
HU35KSUBA:RC_AA443716_AT fructosamine-3-kinase-related protein hs
HG-U133A:218210_AT fructosamine-3-kinase-related protein hs
HG-U133_PLUS_2:218210_AT fructosamine-3-kinase-related protein hs
HG-U133A_2:218210_AT fructosamine-3-kinase-related protein hs
U133_X3P:G13375839_3P_AT fructosamine-3-kinase-related protein hs
HG-U95C:56584_AT fructosamine-3-kinase-related protein hs
HG-U95C:56587_G_AT fructosamine-3-kinase-related protein hs
HG-U95C:64087_I_AT fructosamine-3-kinase-related protein hs
HG-U95C:64088_R_AT fructosamine-3-kinase-related protein hs
HG-U95D:80442_AT fructosamine-3-kinase-related protein hs
Gene Ontology
GO Molecular Function (view graph)
ID Description Evidence Links
16301 kinase activity inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast CAB55130 Hypothetical protein Y116A8C.25 [Caenorhabditis elegans] ref|NP_503025.1| Y116A8C.25 [Caenorhabditis elegans] 0.0
blast CAE57464 Hypothetical protein CBG00429 [Caenorhabditis briggsae] 1.0E-113
blast CAE57464 Hypothetical protein CBG00429 [Caenorhabditis briggsae] 1.0E-102
blast AAQ72345 fructosamine-3-kinase-related protein [Mus musculus] 4.0E-47
blast CAG01102 unnamed protein product [Tetraodon nigroviridis] 9.0E-41
Protein Domains
Database ID Description E-Value
Pfam IPR005581 EMBL-EBI Fructosamine kinase 1.5E-12
Pfam IPR005581 EMBL-EBI Fructosamine kinase 1.5E-12
Sequence
Target Sequence 
>C. ELEGANS:186534_AT
cgaactgtccgaaatactctatacaaaaaccgccaaacttctgaaatgtcgagaaaacgt
gcttccatctcttgttcacggagatttatggggtggaaattggagtatgactactgctga
tggtgctccagagccaataatatttgatccatcgtcaagttattcggatcctgaatttga
atttggaattatgaaaatgtttggtggctggactcaagatttcgaaaataaatacgaaaa
aataatcaagacagcagatggaaaaaatcaaagagtgttactttatgaattgtatcataa
tttgaatcattggaatcattttggaaattcgtatagaaaaaaagaaaaaaaattagacaa
aatttataataatgtttataataattgttataataatgttaggaagaactattgcacaaa
acgtattacaccgaaatctggcaaattgagaaataaggctgtgcggcatccagatttttt
ggcgaacggcattcgccgttcgccgaaccttaattttcgttcggcaatcgtcatttgccg
ttcgccgtttgccgcacagccctggtatgtagctcaa

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
CGAACTGTCCGAAATACTCTATACA 361 251 561 Antisense
AACCGCCAAACTTCTGAAATGTCGA 303 147 588 Antisense
GAGAAAACGTGCTTCCATCTCTTGT 145 393 611 Antisense
GTATGACTACTGCTGATGGTGCTCC 462 455 665 Antisense
CCATCGTCAAGTTATTCGGATCCTG 86 271 709 Antisense
TGGTGGCTGGACTCAAGATTTCGAA 321 551 762 Antisense
AACGTATTACACCGAAATCTGGCAA 589 143 980 Antisense
AAGGCTGTGCGGCATCCAGATTTTT 431 161 1015 Antisense
CGAACGGCATTCGCCGTTCGCCGAA 144 253 1043 Antisense
AATTTTCGTTCGGCAATCGTCATTT 327 175 1072 Antisense
CGCACAGCCCTGGTATGTAGCTCAA 306 253 1113 Antisense
Sequence Source Affymetrix Proprietary Database