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[186363_at]

Description EEED8.14 /REP_DB=WormBase Gene ID /WP=CE02589 /TR=Q19069 /GB=AAC46774.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_total > 97      4grp_total > 03      6grp_total_sub > Increase      6grp_rule_based > S6      4grp_rule_based > L4      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 226
1 2 3 4 range
A 5.8
(-3)
A 		11.4
(-2.8)
A 		10.1
(-2.8)
A 		143.3
(3)
P 		138
B 32.8
(-2.1)
A 		18.3
(-2.5)
A 		2.1
(-3)
A 		197.6
(3)
P 		196
C 43.5
(-2)
A 		12.4
(-2.9)
A 		7.5
(-3)
A 		227.9
(3)
P 		220
avr 27.4
(-2.3) 		14
(-2.8) 		6.6
(-3) 		189.6
(3) 		183

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 414
1 2 3 4 5 6 range
A 7
(-3)
A 		8.3
(-3)
A 		11.7
(-2.9)
A 		104.1
(-0.7)
A 		231.7
(2.3)
P 		262.3
(3)
P 		255
B 14.4
(-3)
A 		14
(-3)
A 		14.7
(-3)
A 		94.8
(-1.8)
A 		228.7
(0.2)
P 		421.3
(3)
P 		407
C 19.2
(-2.9)
A 		13.7
(-3)
A 		42.7
(-2.4)
A 		80.6
(-1.7)
A 		171.4
(0)
P 		324.2
(3)
P 		311
avr 13.5
(-3) 		12
(-3) 		23
(-2.8) 		93.2
(-1.5) 		210.6
(0.7) 		335.9
(3) 		324
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 42
1 2 3 4 range
A 2.1
(-3)
A 		2.5
(-2.9)
A 		2.6
(-2.8)
A 		21
(3)
P 		19
B 10.5
(-1.6)
A 		4.5
(-2.4)
A 		0.5
(-3)
A 		42.1
(3)
P 		42
C 14.4
(-1)
A 		3.6
(-2.8)
A 		2.6
(-3)
A 		38.4
(3)
P 		36
avr 9
(-1.7) 		3.5
(-2.7) 		1.9
(-3) 		33.8
(3) 		32

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 156
1 2 3 4 5 6 range
A 1.3
(-3)
A 		3
(-2.9)
A 		2.5
(-2.9)
A 		26.4
(-0.8)
A 		69.9
(3)
P 		63.9
(2.5)
P 		69
B 5
(-2.9)
A 		4.7
(-3)
A 		3.6
(-3)
A 		25.1
(-2.2)
A 		92.9
(0.5)
P 		157.1
(3)
P 		154
C 7.1
(-2.8)
A 		4.2
(-3)
A 		10.9
(-2.6)
A 		16.2
(-2.3)
A 		55.4
(-0.1)
P 		108.5
(3)
P 		104
avr 4.5
(-3) 		4
(-3) 		5.7
(-2.9) 		22.6
(-1.9) 		72.7
(0.9) 		109.8
(3) 		106
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 186363_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.4471
Sequence Type Exemplar sequence
Representative Public ID EEED8.14 NCBI
Target Description EEED8.14 /REP_DB=WormBase Gene ID /WP=CE02589 /TR=Q19069 /GB=AAC46774.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_062623(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_062623 NCBI Caenorhabditis elegans EEED8.14 (EEED8.14) mRNA, complete cds. 11/11 None
EEED8.14 ENSEMBL cdna:known chromosome:CEL140:II:5412192:5413984:-1 gene:EEED8.14 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000023175 2/11 Cross Hyb Matching Probes None
SNAP00000023176 7/11 Cross Hyb Matching Probes None
GENEFINDER00000023182 2/11 Cross Hyb Matching Probes None
GENEFINDER00000023187 7/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:5412189-5413982(-) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl EEED8.14
Entrez Gene 184046 Entrez gene
SwissProt Q19069 EMBL-EBI
WormBase CE02589 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast AAC46774 Hypothetical protein EEED8.14 [Caenorhabditis elegans] ref|NP_495024.1| EEED8.14 [Caenorhabditis elegans] 0.0
Sequence
Target Sequence 
>C. ELEGANS:186363_AT
gaaaccttcttcattgcacaactacccacattgtgcaaaacctgaggatccaattagaaa
gagtcaatggctgaatggacatctgagatattctctccacggagaatacttgacatggaa
attattcgttttaattgataatacctgggatactgtcaaggaaacaacaattcttcttgg
atatgaaacgaaatattccgatcacactgaaacttggactttcgagaataatcatctcat
catcattttcaaaaaccggactgatcacaccatcatcaagaagttcttccagttcactgt
cgacggaaaaatgagtgcacaaccggttggaaagtccgacatgcagactcttcgcgatga
aaatgaagtgcttcgctcactgctcgtcaaagtaaaagtacacttgtcccgattgtactt
cgat

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GAAACCTTCTTCATTGCACAACTAC 219 359 699 Antisense
GACATCTGAGATATTCTCTCCACGG 573 369 776 Antisense
AATATTCCGATCACACTGAAACTTG 629 173 890 Antisense
CATCTCATCATCATTTTCAAAAACC 195 213 931 Antisense
AAAACCGGACTGATCACACCATCAT 639 131 950 Antisense
CACACCATCATCAAGAAGTTCTTCC 633 195 964 Antisense
TTCTTCCAGTTCACTGTCGACGGAA 53 687 982 Antisense
AAAAATGAGTGCACAACCGGTTGGA 422 129 1005 Antisense
AAATGAAGTGCTTCGCTCACTGCTC 41 121 1059 Antisense
TTCGCTCACTGCTCGTCAAAGTAAA 154 697 1070 Antisense
ACACTTGTCCCGATTGTACTTCGAT 118 107 1098 Antisense
Sequence Source Affymetrix Proprietary Database