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[186166_at]

Description T10B11.7 /REP_DB=WormBase Gene ID /WP=CE18246 /TR=Q9TZH7 /GB=AAC67469.1 /SUBMIT=ST.LOUIS /CHR=1 /FEA=Sanger Annotation
Cluster 6grp_high1_10_10 > 16      4grp_high_8_8 > 11      6grp_total > 25      4grp_total > 21      6grp_high1_sub > De      6grp_total_sub > Decrease      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 87
1 2 3 4 range
A 61.5
(0.5)
P 		35.1
(-2.6)
A 		31.5
(-3)
A 		83.2
(3)
P 		52
B 71
(3)
P 		36.3
(-2.8)
P 		35.2
(-3)
P 		55.7
(0.4)
P 		36
C 78.7
(0.7)
P 		50.3
(-1.2)
P 		24.9
(-3)
P 		111.9
(3)
P 		87
avr 70.4
(1.5) 		40.6
(-1.9) 		30.5
(-3) 		83.6
(3) 		53

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 67
1 2 3 4 5 6 range
A 19.3
(-3)
A 		50.3
(3)
P 		34.1
(-0.1)
A 		33.5
(-0.3)
A 		26.1
(-1.7)
M 		32.1
(-0.5)
A 		31
B 74.4
(3)
P 		32.5
(-2.3)
P 		43
(-1)
M 		42.3
(-1.1)
P 		27.4
(-3)
P 		35.7
(-1.9)
P 		47
C 72.9
(2.5)
P 		78.8
(3)
P 		38.7
(-0.6)
P 		22.1
(-2.1)
A 		12.3
(-3)
P 		30.3
(-1.4)
A 		67
avr 55.5
(3) 		53.9
(2.7) 		38.6
(-0) 		32.6
(-1.1) 		21.9
(-3) 		32.7
(-1.1) 		34
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 18
1 2 3 4 range
A 22.4
(3)
P 		7.6
(-3)
A 		8.2
(-2.8)
A 		12.2
(-1.1)
P 		15
B 22.6
(3)
P 		9
(-2.7)
P 		8.2
(-3)
P 		11.9
(-1.5)
P 		14
C 26
(3)
P 		14.5
(-1)
P 		8.7
(-3)
P 		18.9
(0.5)
P 		17
avr 23.7
(3) 		10.4
(-2.2) 		8.4
(-3) 		14.3
(-0.7) 		15

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 23
1 2 3 4 5 6 range
A 3.6
(-3)
A 		17.9
(3)
P 		7.4
(-1.4)
A 		8.5
(-0.9)
A 		7.9
(-1.2)
M 		7.8
(-1.2)
A 		14
B 25.9
(3)
P 		10.8
(-2.8)
P 		10.4
(-3)
M 		11.2
(-2.7)
P 		11.1
(-2.7)
P 		13.3
(-1.9)
P 		16
C 27
(3)
P 		24.1
(2.2)
P 		9.9
(-1.5)
P 		4.4
(-2.9)
A 		4
(-3)
P 		10.1
(-1.4)
A 		23
avr 18.8
(3) 		17.6
(2.4) 		9.2
(-2.2) 		8
(-2.8) 		7.7
(-3) 		10.4
(-1.5) 		11
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 186166_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.2307
Sequence Type Exemplar sequence
Representative Public ID T10B11.7 NCBI
Target Description T10B11.7 /REP_DB=WormBase Gene ID /WP=CE18246 /TR=Q9TZH7 /GB=AAC67469.1 /SUBMIT=ST.LOUIS /CHR=1 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_059580(10)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_059580 NCBI Caenorhabditis elegans T10B11.7 (T10B11.7) mRNA, complete cds. 10/11 None
SNAP00000021313 ENSEMBL cdna:SNAP chromosome:CEL140:I:6954167:6956814:-1 11/11 None
GENEFINDER00000021319 ENSEMBL cdna:GeneFinder chromosome:CEL140:I:6954167:6958590:-1 11/11 None
T10B11.7 ENSEMBL cdna:known chromosome:CEL140:I:6954196:6958590:-1 gene:T10B11.7 10/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrI:6954097-6958521(-) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl T10B11.7
Entrez Gene 188371 Entrez gene
SwissProt Q9TZH7 EMBL-EBI
WormBase CE34365 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast NP_491981 T10B11.7 [Caenorhabditis elegans] gb|AAC67469.2| Hypothetical protein T10B11.7 [Caenorhabditis elegans] 0.0
Sequence
Target Sequence 
>C. ELEGANS:186166_AT
atggatttgaacttcctggcgatgattatgtactgcctcctttgccagccgataaatcaa
catggaccagagagcaacataaaatggacatttatggaccaatatattgtgccttacaaa
gtttcaagcctgcatacacgactgatatgacttctgaattcctcgaagatgatggtgata
cggaatttaaatccgaaaattcagaatcagattcggatagtgaagacgaacagaaagtcg
aaaatgatgtagcatcaagtgcagatgacattgaatttatagaaattgtagaagctgaga
ggaagatggatcaaaatcttgcgcaacaagttcgttcttcattcgtgacaactgcagaaa
atacagaaaataatatgctcatggaggacgattcatcagaacaaggatcttcaaaattta
atagaaatgcatctcgtagatcaaccgaaaatatcgagttcatcactattgacgatgacg
acgacgacgataatgatattgagcgtccaacgcagtcactggt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
ATGGATTTGAACTTCCTGGCGATGA 413 51 1235 Antisense
GGCGATGATTATGTACTGCCTCCTT 380 541 1252 Antisense
CTCCTTTGCCAGCCGATAAATCAAC 362 235 1271 Antisense
GTGCCTTACAAAGTTTCAAGCCTGC 265 477 1343 Antisense
TTCAAGCCTGCATACACGACTGATA 7 687 1357 Antisense
TGATATGACTTCTGAATTCCTCGAA 47 565 1377 Antisense
CTTGCGCAACAAGTTCGTTCTTCAT 285 219 1552 Antisense
CGTTCTTCATTCGTGACAACTGCAG 31 249 1567 Antisense
GAAATGCATCTCGTAGATCAACCGA 19 363 1658 Antisense
ATATCGAGTTCATCACTATTGACGA 421 3 1685 Antisense
TTGAGCGTCCAACGCAGTCACTGGT 235 653 1733 Antisense
Sequence Source Affymetrix Proprietary Database