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[185830_at]

Description W01A11.2 /REP_DB=WormBase Gene ID /WP=CE14392 /TR=Q23067 /GB=AAB04969.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 88      4grp_total > 01      6grp_total_sub > Increase      6grp_rule_based > S6      4grp_rule_based > L4      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 473
1 2 3 4 range
A 84.2
(-2.8)
A 		73.9
(-3)
P 		110.6
(-2.2)
P 		351.1
(3)
P 		277
B 89.2
(-2.7)
A 		62.5
(-3)
M 		115.7
(-2.3)
A 		535.9
(3)
P 		473
C 69.6
(-3)
A 		109
(-2.3)
A 		84.5
(-2.7)
M 		387.1
(3)
P 		318
avr 81
(-3) 		81.8
(-3) 		103.6
(-2.6) 		424.7
(3) 		344

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 803
1 2 3 4 5 6 range
A 92.9
(-2.6)
A 		40.9
(-3)
A 		92.3
(-2.6)
M 		110
(-2.5)
P 		399.6
(-0.3)
P 		843.7
(3)
P 		803
B 58.1
(-3)
A 		72.8
(-2.9)
P 		71.6
(-2.9)
A 		80.7
(-2.8)
P 		546.4
(1.6)
P 		699
(3)
P 		641
C 55.6
(-3)
A 		81.3
(-2.7)
A 		97.3
(-2.6)
A 		56.7
(-3)
A 		457.6
(1.2)
P 		630.3
(3)
P 		575
avr 68.9
(-3) 		65
(-3) 		87.1
(-2.8) 		82.5
(-2.8) 		467.9
(0.7) 		724.3
(3) 		659
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 99
1 2 3 4 range
A 30.6
(-0.5)
A 		16
(-3)
P 		28.9
(-0.8)
P 		51.4
(3)
P 		35
B 28.4
(-2.2)
A 		15.4
(-3)
M 		26.8
(-2.3)
A 		114.2
(3)
P 		99
C 23
(-3)
A 		31.3
(-1.8)
A 		29.4
(-2.1)
M 		65.3
(3)
P 		42
avr 27.3
(-2.3) 		20.9
(-3) 		28.4
(-2.2) 		77
(3) 		56

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 249
1 2 3 4 5 6 range
A 17.1
(-2.9)
A 		14.6
(-3)
A 		20.1
(-2.8)
M 		27.9
(-2.6)
P 		120.6
(0.3)
P 		205.4
(3)
P 		191
B 20.2
(-2.9)
A 		24.2
(-2.8)
P 		17.4
(-3)
A 		21.4
(-2.9)
P 		222
(2)
P 		260.7
(3)
P 		243
C 20.6
(-2.7)
A 		24.8
(-2.6)
A 		24.8
(-2.6)
A 		11.4
(-3)
A 		148.1
(1.1)
P 		211
(3)
P 		200
avr 19.3
(-3) 		21.2
(-2.9) 		20.8
(-3) 		20.2
(-3) 		163.6
(1.2) 		225.7
(3) 		206
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 185830_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.11763
Sequence Type Exemplar sequence
Representative Public ID W01A11.2 NCBI
Target Description W01A11.2 /REP_DB=WormBase Gene ID /WP=CE14392 /TR=Q23067 /GB=AAB04969.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_072248(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_072248 NCBI Caenorhabditis elegans W01A11.2 (W01A11.2) mRNA, complete cds. 11/11 None
SNAP00000000914 ENSEMBL cdna:SNAP chromosome:CEL140:V:6499704:6500985:1 11/11 None
GENEFINDER00000000920 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:6499704:6504959:1 11/11 None
W01A11.2 ENSEMBL cdna:known chromosome:CEL140:V:6499704:6500985:1 gene:W01A11.2 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:6499703-6500985(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl W01A11.2
Entrez Gene 189077 Entrez gene
SwissProt Q23067 EMBL-EBI
WormBase CE14392 Wormbase
Functional Annotations
Ortholog
ID Title Organism
CANINE_2:CFAAFFX.8988.1.S1_AT similar to monoacylglycerol O-acyltransferase 2 cfa
CANINE_2:CFAAFFX.8993.1.S1_AT similar to monoacylglycerol O-acyltransferase 2 cfa
CANINE_2:CFAAFFX.8993.1.S1_S_AT similar to monoacylglycerol O-acyltransferase 2 cfa
DROSOPHILA_2:1626094_AT dm
DROSGENOME1:146762_AT dm
CHICKEN:GGAAFFX.24369.1.S1_AT similar to monoacylglycerol O-acyltransferase 2; acyl CoA:monoacylglycerol acyltransferase 2 gga
HG-U133_PLUS_2:207491_AT monoacylglycerol O-acyltransferase 2 hs
HG-U133A:207491_AT monoacylglycerol O-acyltransferase 2 hs
HG-U133A_2:207491_AT monoacylglycerol O-acyltransferase 2 hs
U133_X3P:G13376661_3P_AT monoacylglycerol O-acyltransferase 2 hs
U133_X3P:HS.272790.0.S1_3P_X_AT monoacylglycerol O-acyltransferase 2 hs
U133_X3P:HS.272790.0.S1_3P_AT monoacylglycerol O-acyltransferase 2 hs
HG-U133_PLUS_2:232428_AT monoacylglycerol O-acyltransferase 2 hs
HG-U133B:232428_AT monoacylglycerol O-acyltransferase 2 hs
MU11KSUBA:AA529901_S_AT monoacylglycerol O-acyltransferase 2 mm
MG-U74BV2:111213_AT monoacylglycerol O-acyltransferase 2 mm
MG-U74AV2:161107_R_AT monoacylglycerol O-acyltransferase 2 mm
MOE430A:1455099_AT monoacylglycerol O-acyltransferase 2 mm
MOUSE430A_2:1455099_AT monoacylglycerol O-acyltransferase 2 mm
MOUSE430_2:1455099_AT monoacylglycerol O-acyltransferase 2 mm
MG-U74AV2:162432_F_AT Monoacylglycerol O-acyltransferase 2, mRNA (cDNA clone MGC:60738 IMAGE:30041797) mm
MU19KSUBC:TC37711_AT Monoacylglycerol O-acyltransferase 2, mRNA (cDNA clone MGC:60738 IMAGE:30041797) mm
Protein Similarities
Method ID Description E-Value
blast AAB04969 Hypothetical protein W01A11.2 [Caenorhabditis elegans] ref|NP_504649.1| W01A11.2 [Caenorhabditis elegans] 0.0
blast CAE71891 Hypothetical protein CBG18949 [Caenorhabditis briggsae] 0.0
blast AAB04970 Hypothetical protein W01A11.1 [Caenorhabditis elegans] ref|NP_504650.1| W01A11.1 [Caenorhabditis elegans] 0.0
blast CAE71892 Hypothetical protein CBG18950 [Caenorhabditis briggsae] 0.0
blast AAK71373 Hypothetical protein K07B1.4a [Caenorhabditis elegans] ref|NP_505413.1| K07B1.4a [Caenorhabditis elegans] 3.0E-88
Protein Domains
Database ID Description E-Value
Pfam IPR007130 EMBL-EBI Diacylglycerol acyltransferase 1.0E-126
Pfam IPR010497 EMBL-EBI Epoxide hydrolase, N-terminal 2.2E-67
Trans Membrane
ID Number Of Domains Domain Boundaries
NP_504649.1 1 41-63
W01A11.2 1 41-63
SNAP00000000914 1 41-63
GENEFINDER00000000920 3 41-63,68-85,368-390
Sequence
Target Sequence 
>C. ELEGANS:185830_AT
ttgtcattggcggagcctcggaggctcttgaagctcatcccaataaaaatacattgacgt
tgatcaatcgacgtggtttctgcaaatatgctctgaagtttggagcagacctcgtaccaa
tgtacaatttcggagagaatgatttatacgagcagtatgaaaacccgaagggatctagat
tgcgagaagttcaggagaaaatcaaggacatgttcggattgtgtcccccattgctccgcg
gtcgatcgttgttcaaccaataccttatcggattgctgccgttccgaaaaccagttacaa
cagtcatgggaaggccaattcgagtcacccaaaccgacgagccaaccgttgagcagattg
atgagctgcatgcaaaatattgtgatgctctctacaatctgttcgagg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TTGTCATTGGCGGAGCCTCGGAGGC 642 701 632 Antisense
CCTCGGAGGCTCTTGAAGCTCATCC 302 257 647 Antisense
GATCAATCGACGTGGTTTCTGCAAA 227 421 693 Antisense
TGGAGCAGACCTCGTACCAATGTAC 397 545 732 Antisense
GGACATGTTCGGATTGTGTCCCCCA 478 523 837 Antisense
CGCGGTCGATCGTTGTTCAACCAAT 443 255 868 Antisense
TACCTTATCGGATTGCTGCCGTTCC 204 649 892 Antisense
GCTGCCGTTCCGAAAACCAGTTACA 472 287 906 Antisense
GGGAAGGCCAATTCGAGTCACCCAA 347 493 939 Antisense
CCGACGAGCCAACCGTTGAGCAGAT 384 263 965 Antisense
GATGCTCTCTACAATCTGTTCGAGG 4 415 1015 Antisense
Sequence Source Affymetrix Proprietary Database