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[185807_at]

Description C33C12.7 /REP_DB=WormBase Gene ID /WP=CE08555 /TR=O16579 /GB=AAB66059.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Cluster 4grp_high_8_8 > 05      6grp_total > 39      4grp_total > 11      6grp_total_sub > Cup      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 157
1 2 3 4 range
A 30.9
(-2.6)
A 		53.5
(-1.2)
A 		25.2
(-3)
A 		120.5
(3)
M 		95
B 56.8
(2.2)
P 		37.6
(-0.6)
P 		21.3
(-3)
A 		62.1
(3)
A 		41
C 45
(-2.4)
A 		58.2
(-1.9)
A 		29.9
(-3)
P 		178
(3)
P 		148
avr 44.2
(-1.8) 		49.8
(-1.5) 		25.5
(-3) 		120.2
(3) 		95

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 61
1 2 3 4 5 6 range
A 70.4
(3)
P 		9.4
(-3)
A 		34.4
(-0.5)
A 		17.5
(-2.2)
A 		43.9
(0.4)
P 		21.9
(-1.8)
A 		61
B 18.8
(-2.2)
A 		20.7
(-1.7)
A 		21.3
(-1.6)
A 		22.2
(-1.4)
A 		15.4
(-3)
A 		40.3
(3)
A 		25
C 28.1
(-0.6)
P 		43.4
(3)
P 		17.9
(-3)
A 		23.2
(-1.8)
A 		35.7
(1.2)
M 		30.4
(-0.1)
A 		26
avr 39.1
(3) 		24.5
(-1.8) 		24.5
(-1.8) 		21
(-3) 		31.7
(0.5) 		30.9
(0.3) 		18
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 25
1 2 3 4 range
A 11.3
(-0.4)
A 		11.6
(-0.3)
A 		6.6
(-3)
A 		17.6
(3)
M 		11
B 18.1
(3)
P 		9.3
(-1)
P 		4.9
(-3)
A 		13.2
(0.8)
A 		13
C 14.9
(-1.6)
A 		16.7
(-1.1)
A 		10.4
(-3)
P 		30
(3)
P 		20
avr 14.8
(0.5) 		12.5
(-0.6) 		7.3
(-3) 		20.3
(3) 		13

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 12
1 2 3 4 5 6 range
A 13
(2.9)
P 		3.3
(-3)
A 		7.5
(-0.5)
A 		4.4
(-2.3)
A 		13.2
(3)
P 		5.3
(-1.8)
A 		10
B 6.6
(-2.1)
A 		6.9
(-2)
A 		5.2
(-3)
A 		5.9
(-2.6)
A 		6.2
(-2.4)
A 		15
(3)
A 		10
C 10.4
(1.1)
P 		13.2
(3)
P 		4.5
(-3)
A 		4.7
(-2.9)
A 		11.5
(1.8)
M 		10.2
(0.9)
A 		9
avr 10
(2.7) 		7.8
(0.2) 		5.7
(-2.2) 		5
(-3) 		10.3
(3) 		10.2
(2.9) 		5
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 185807_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.5869
Sequence Type Exemplar sequence
Representative Public ID C33C12.7 NCBI
Target Description C33C12.7 /REP_DB=WormBase Gene ID /WP=CE08555 /TR=O16579 /GB=AAB66059.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Genome Target Overlap based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade B annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_061805
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
GENEFINDER00000027215 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:2174614:2175461:-1 10/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
NM_061805 5/11 Cross Hyb Matching Probes None
C33C12.7 5/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:2174612-2175460(-) 93.67 100.0
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast NP_494206 C33C12.7 [Caenorhabditis elegans] gb|AAB66059.2| Hypothetical protein C33C12.7 [Caenorhabditis elegans] 1.0E-37
Sequence
Target Sequence 
>C. ELEGANS:185807_AT
taatttacagctccatgtgcgtattcgaagaagatggcgaatactgaccttcttgaaaaa
gccaacgaaatttttcaaaaagagtttaaggatggtgttcgacgagaagttggtgcatat
tgcaatggagactgcatgtggtaagcctcccaaagatatgggcatcatcactcttgggga
tggatatgaagcctcggaaaacattgcggcacatcatgaccgagtagcttgtattgagaa
aatatgcgagagcaagaaagctacaactagcatctttttcaaacgaagattttctggctt
ttctcatattctaggccatgttggctcggccacagctcgcgtcgcgtgtcgcgtcgcggc
gttttccattgccaatggagcgcgaaaaatgcggaaggccagaagcccagctcctgagaa
agccgccgaaaaatcggacgagaagttagattacaaaaaggacgacgaaaagaaaagtga
cacaactgctggagccc

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TAATTTACAGCTCCATGTGCGTATT 255 635 108 Antisense
GATGGCGAATACTGACCTTCTTGAA 643 405 140 Antisense
ACTGCATGTGGTAAGCCTCCCAAAG 231 97 238 Antisense
ATATGGGCATCATCACTCTTGGGGA 488 21 263 Antisense
CCTCGGAAAACATTGCGGCACATCA 583 265 299 Antisense
GGCACATCATGACCGAGTAGCTTGT 325 535 315 Antisense
GCTACAACTAGCATCTTTTTCAAAC 581 299 367 Antisense
TTCTGGCTTTTCTCATATTCTAGGC 357 695 399 Antisense
TCTAGGCCATGTTGGCTCGGCCACA 470 613 417 Antisense
ATGCGGAAGGCCAGAAGCCCAGCTC 599 35 496 Antisense
AAAAGTGACACAACTGCTGGAGCCC 73 133 580 Antisense
Sequence Source Affymetrix Proprietary Database