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[185680_at]

Description Y32B12A.2 /REP_DB=WormBase Gene ID /WP=CE19059 /TR=Q9XXG9 /GB=CAA19480.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 33      4grp_total > 09      6grp_cgc > 80      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 54
1 2 3 4 range
A 6.6
(-3)
A 		9
(-1.8)
A 		13.6
(0.6)
A 		18.4
(3)
A 		12
B 6.5
(-2.6)
A 		9.1
(0)
A 		6.1
(-3)
A 		12.1
(3)
A 		6
C 4.4
(-3)
A 		7.5
(-2.7)
A 		5.8
(-2.8)
A 		58.5
(3)
A 		54
avr 5.8
(-3) 		8.5
(-2.3) 		8.5
(-2.3) 		29.7
(3) 		24

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 13
1 2 3 4 5 6 range
A 7.1
(-1.3)
A 		9.2
(-0.4)
A 		16.3
(3)
A 		3.8
(-2.9)
A 		8.4
(-0.7)
A 		3.6
(-3)
A 		13
B 7.2
(3)
A 		5.7
(0.4)
A 		4.8
(-1.2)
A 		5.1
(-0.7)
A 		3.8
(-3)
A 		3.8
(-3)
A 		3
C 11
(3)
A 		5.3
(-2.1)
A 		6.3
(-1.2)
A 		4.8
(-2.6)
A 		9.7
(1.8)
A 		4.3
(-3)
A 		7
avr 8.4
(2.2) 		6.7
(0.2) 		9.1
(3) 		4.6
(-2.2) 		7.3
(0.9) 		3.9
(-3) 		5
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 9
1 2 3 4 range
A 2.4
(-1.5)
A 		2
(-3)
A 		3.6
(3)
A 		2.7
(-0.4)
A 		2
B 2.1
(0.5)
A 		2.3
(1.5)
A 		1.4
(-3)
A 		2.6
(3)
A 		1
C 1.5
(-3)
A 		2.2
(-2.5)
A 		2
(-2.6)
A 		9.9
(3)
A 		8
avr 2
(-3) 		2.2
(-2.6) 		2.3
(-2.4) 		5.1
(3) 		3

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 3
1 2 3 4 5 6 range
A 1.3
(-2.1)
A 		3.3
(2.5)
A 		3.5
(3)
A 		1
(-2.8)
A 		2.5
(0.7)
A 		0.9
(-3)
A 		3
B 2.5
(3)
A 		1.9
(0.2)
A 		1.2
(-3)
A 		1.3
(-2.5)
A 		1.5
(-1.6)
A 		1.4
(-2.1)
A 		1
C 4.1
(3)
A 		1.6
(-1.8)
A 		1.6
(-1.8)
A 		1
(-3)
A 		3.1
(1.1)
A 		1.4
(-2.2)
A 		3
avr 2.6
(3) 		2.3
(1.8) 		2.1
(1) 		1.1
(-3) 		2.4
(2.2) 		1.2
(-2.6) 		2
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 185680_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.12554
Sequence Type Exemplar sequence
Representative Public ID Y32B12A.2 NCBI
Target Description Y32B12A.2 /REP_DB=WormBase Gene ID /WP=CE19059 /TR=Q9XXG9 /GB=CAA19480.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
Y32B12A.2 ENSEMBL cdna:pseudogene chromosome:CEL140:V:16492113:16493102:-1 gene:Y32B12A.2 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:16492112-16494555(-) 100.0 100.0
Public Domain and Genome References
Ensembl Y32B12A.2
Sequence
Target Sequence 
>C. ELEGANS:185680_AT
tgctgtttttcttaacataccccgcaaatatatgcacaagcattcgcccgacgcttgtgt
ttttgatatgttttgaccgtgtagatgcggtttattcaccagttttataccacaacaatc
gccatcgaatatcttcattggttattttgccctttatgattttgtctgctgctctcgacc
aacacatttggttcggatactacggggatgatggagatgttcctttggaatgcgatgaat
tcaggtgcactgttaatgagtgttacattaactattggctatcacacgaacaagaaactc
atttcattagcgccggattgactttgattatatttttccggctttttatttatgataggt
gtacaaagtaccagtctagcaaggttataacaaaagccacaagaattgcgctaccggatt
caatcatactaataacttttaacatatttccgtccttcatcttcaaggaagtcccatcta
taagcttcgagacagttggaccattagttgtcgtatttgaaactgcggaactgctcattg
aaaca

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TGCTGTTTTTCTTAACATACCCCGC 313 579 233 Antisense
ATATATGCACAAGCATTCGCCCGAC 550 19 260 Antisense
GCCCGACGCTTGTGTTTTTGATATG 85 287 278 Antisense
TATACCACAACAATCGCCATCGAAT 130 661 338 Antisense
ATTGGTTATTTTGCCCTTTATGATT 394 3 369 Antisense
CTTTATGATTTTGTCTGCTGCTCTC 175 223 384 Antisense
AAACTCATTTCATTAGCGCCGGATT 299 127 527 Antisense
GCCACAAGAATTGCGCTACCGGATT 100 279 628 Antisense
TTTTAACATATTTCCGTCCTTCATC 494 675 669 Antisense
TAAGCTTCGAGACAGTTGGACCATT 580 629 713 Antisense
AACTGCGGAACTGCTCATTGAAACA 241 141 753 Antisense
Sequence Source Affymetrix Proprietary Database