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[185629_at]

Description C37H5.12 /REP_DB=WormBase Gene ID /WP=CE08635 /TR=P91142 /GB=AAB42375.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 92      4grp_total > 33      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 8
1 2 3 4 range
A 0.8
(-3)
A 		5.3
(1.6)
A 		1.3
(-2.5)
A 		6.7
(3)
A 		6
B 1.2
(-3)
A 		2.8
(-1.8)
A 		9.1
(3)
A 		1.5
(-2.8)
A 		8
C 3.7
(3)
A 		3.2
(1.8)
A 		1.1
(-3)
A 		3.3
(2.1)
A 		3
avr 1.9
(-3) 		3.8
(3) 		3.8
(3) 		3.8
(3) 		2

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 5
1 2 3 4 5 6 range
A 1.2
(-2.9)
A 		1.8
(-2.2)
A 		1.4
(-2.6)
A 		1.1
(-3)
A 		6.2
(3)
A 		1.3
(-2.8)
A 		5
B 1.8
(-2.1)
A 		4.6
(3)
A 		1.8
(-2.1)
A 		3.4
(0.8)
A 		1.4
(-2.8)
A 		1.3
(-3)
A 		3
C 1.5
(-0.4)
A 		0.8
(-3)
A 		1.7
(0.4)
A 		1.7
(0.4)
A 		1.2
(-1.5)
A 		2.4
(3)
A 		2
avr 1.5
(-3) 		2.4
(0.9) 		1.6
(-2.6) 		2.1
(-0.4) 		2.9
(3) 		1.7
(-2.1) 		1
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 2
1 2 3 4 range
A 0.3
(-3)
A 		1.1
(3)
A 		0.4
(-2.3)
A 		1
(2.3)
A 		1
B 0.4
(-2.7)
A 		0.7
(-1.7)
A 		2.1
(3)
A 		0.3
(-3)
A 		2
C 1.2
(3)
A 		0.9
(0.8)
A 		0.4
(-3)
A 		0.6
(-1.5)
A 		1
avr 0.6
(-3) 		0.9
(1.5) 		1
(3) 		0.6
(-3) 		0

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 2
1 2 3 4 5 6 range
A 0.2
(-3)
A 		0.6
(-1.6)
A 		0.3
(-2.6)
A 		0.3
(-2.6)
A 		1.9
(3)
A 		0.3
(-2.6)
A 		2
B 0.6
(-1.9)
A 		1.5
(3)
A 		0.4
(-3)
A 		0.9
(-0.3)
A 		0.6
(-1.9)
A 		0.5
(-2.5)
A 		1
C 0.6
(1)
A 		0.2
(-3)
A 		0.4
(-1)
A 		0.3
(-2)
A 		0.4
(-1)
A 		0.8
(3)
A 		1
avr 0.5
(-2) 		0.8
(1) 		0.4
(-3) 		0.5
(-2) 		1
(3) 		0.5
(-2) 		1
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 185629_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.15817
Sequence Type Exemplar sequence
Representative Public ID C37H5.12 NCBI
Target Description C37H5.12 /REP_DB=WormBase Gene ID /WP=CE08635 /TR=P91142 /GB=AAB42375.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Design Representative Id based pipeline to a Affymetrix Proprietary Database identifier using 1 transcript(s).
Annotation Grade This is a grade R annotation.
Annotation Transcript Cluster (# of Matching Probes) C37H5.12
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
C37H5.12 C37H5.12 /REP_DB=WormBase Gene ID /WP=CE08635 /TR=P91142 /GB=AAB42375.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:4846776-4847297(-) 66.67 100.0
Sequence
Target Sequence 
>C. ELEGANS:185629_AT
cttcgctgcaatttgctggccagttctaaaatgtccaaatatcatttaaaaccttccaaa
aaagtcgaccttaaacaattttactccttttatacttcaattgcgtttcaattgatcgta
attaaatattctagaggtttaaaccaggggcggaaaatttgccggatttgccgaactagc
cgggtttggcgagctcggaaaatttgccgaatttgctgtgctcggcaaatattgaaaaaa
aaatttgccacatccctctggtctacagcaattctcgaaatt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
CTTCGCTGCAATTTGCTGGCCAGTT 14 221 64 Antisense
TTTGCTGGCCAGTTCTAAAATGTCC 481 661 75 Antisense
TCCAAATATCATTTAAAACCTTCCA 212 587 97 Antisense
TTTACTCCTTTTATACTTCAATTGC 243 673 143 Antisense
CCTTTTATACTTCAATTGCGTTTCA 481 257 149 Antisense
ATTGCGTTTCAATTGATCGTAATTA 609 5 163 Antisense
GCCGGATTTGCCGAACTAGCCGGGT 282 281 224 Antisense
GCCGAACTAGCCGGGTTTGGCGAGC 441 281 233 Antisense
TAGCCGGGTTTGGCGAGCTCGGAAA 578 649 240 Antisense
CCCTCTGGTCTACAGCAATTCTCGA 198 257 317 Antisense
CTGGTCTACAGCAATTCTCGAAATT 283 241 321 Antisense
Sequence Source Affymetrix Proprietary Database