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[185163_s_at]

Description M01G12.14 /REP_DB=WormBase Gene ID /WP=CE27588 /TR=O62316 /GB=CAB04619.2 /SUBMIT=HINXTON /CHR=1 /FEA=Sanger Annotation
Cluster 6grp_total > 76      4grp_total > 04      6grp_total_sub > Increase      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 70
1 2 3 4 range
A 7.3
(-2.6)
A 		3.8
(-3)
A 		6.6
(-2.6)
A 		50.8
(3)
A 		47
B 33.5
(3)
A 		7.7
(-2.5)
A 		6.8
(-2.7)
A 		5.5
(-3)
A 		28
C 4.4
(-2.8)
A 		10.1
(-2.3)
A 		2.4
(-3)
A 		71.9
(3)
A 		70
avr 15.1
(-1.4) 		7.2
(-2.7) 		5.3
(-3) 		42.7
(3) 		37

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 14
1 2 3 4 5 6 range
A 3.4
(-2.7)
A 		4.7
(-2.1)
A 		2.7
(-3)
A 		9.3
(-0)
A 		3
(-2.9)
A 		16.1
(3)
A 		13
B 4.4
(-2.1)
A 		2.6
(-3)
A 		15.3
(3)
A 		4
(-2.3)
A 		6.6
(-1.1)
A 		12.5
(1.7)
A 		13
C 5.4
(-1.1)
A 		2.5
(-3)
A 		3.3
(-2.5)
A 		11.5
(3)
A 		9.3
(1.5)
A 		10.5
(2.3)
A 		9
avr 4.4
(-2.3) 		3.3
(-3) 		7.1
(-0.6) 		8.3
(0.1) 		6.3
(-1.1) 		13
(3) 		10
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 11
1 2 3 4 range
A 2.7
(-1.3)
A 		0.8
(-3)
A 		1.7
(-2.2)
A 		7.4
(3)
A 		7
B 10.7
(3)
A 		1.9
(-2.6)
A 		1.6
(-2.7)
A 		1.2
(-3)
A 		10
C 1.4
(-2.7)
A 		2.9
(-1.9)
A 		0.9
(-3)
A 		12.1
(3)
A 		11
avr 4.9
(0.8) 		1.9
(-2.5) 		1.4
(-3) 		6.9
(3) 		6

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 4
1 2 3 4 5 6 range
A 0.6
(-3)
A 		1.7
(-1)
A 		0.6
(-3)
A 		2.4
(0.3)
A 		0.9
(-2.5)
A 		3.9
(3)
A 		3
B 1.5
(-2.1)
A 		0.9
(-3)
A 		3.7
(1.4)
A 		1.1
(-2.7)
A 		2.7
(-0.2)
A 		4.7
(3)
A 		4
C 2
(-0.3)
A 		0.8
(-3)
A 		0.8
(-3)
A 		2.3
(0.3)
A 		3
(1.9)
A 		3.5
(3)
A 		3
avr 1.4
(-2.4) 		1.1
(-3) 		1.7
(-1.8) 		1.9
(-1.3) 		2.2
(-0.7) 		4
(3) 		3
NetAffx Links Cluster Members
Consensus/Exemplar
Group Members
GeneChip Array Information
Probe Set ID 185163_s_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.2221
Sequence Type Exemplar sequence
Representative Public ID M01G12.14 NCBI
Target Description M01G12.14 /REP_DB=WormBase Gene ID /WP=CE27588 /TR=O62316 /GB=CAB04619.2 /SUBMIT=HINXTON /CHR=1 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_060657(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_060657 NCBI Caenorhabditis elegans M01G12.14 (M01G12.14) mRNA, complete cds. 11/11 None
GENEFINDER00000024232 ENSEMBL cdna:GeneFinder chromosome:CEL140:I:12115034:12116540:-1 11/11 None
SNAP00000024220 ENSEMBL cdna:SNAP chromosome:CEL140:I:12115186:12116540:-1 11/11 None
M01G12.14 ENSEMBL cdna:known chromosome:CEL140:I:12115034:12116580:-1 gene:M01G12.14 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrI:12114964-12116623(-) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl M01G12.14
Entrez Gene 173093 Entrez gene
SwissProt O62316 EMBL-EBI
WormBase CE27588 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast CAB04619 Hypothetical protein M01G12.14 [Caenorhabditis elegans] ref|NP_493058.1| M01G12.14 [Caenorhabditis elegans] 0.0
blast CAB60386 Hypothetical protein Y47H10A.4 [Caenorhabditis elegans] ref|NP_493055.1| Y47H10A.4 [Caenorhabditis elegans] 3.0E-69
blast CAB60386 Hypothetical protein Y47H10A.4 [Caenorhabditis elegans] ref|NP_493055.1| Y47H10A.4 [Caenorhabditis elegans] 5.0E-69
blast CAB60385 Hypothetical protein Y47H10A.3 [Caenorhabditis elegans] ref|NP_493054.2| Y47H10A.3 [Caenorhabditis elegans] 2.0E-67
blast CAB60385 Hypothetical protein Y47H10A.3 [Caenorhabditis elegans] ref|NP_493054.2| Y47H10A.3 [Caenorhabditis elegans] 3.0E-67
Sequence
Target Sequence 
>C. ELEGANS:185163_S_AT
ggatgaggagccggtcggtggtgatggaacggtcagaaaggcagttttcaaagcaacaat
tccacgtggcaatgagcacccttacagtgttttgtattccggggagatggatgccattta
tgatgaggaaagtcgcgagcacgtggagctgaaagtctttgtaaatggactagacaatta
caagtggaaattcagaagttgctggatgtactggcaagccttcttctcgaatgttccaac
actggttattggatcaagaacggggaaggagtatcagtcgatttcaaaacatattcccgg
attctcgttgtacaaagttgaaaaactggaacgcgattcgattccttcaacggcagcagc
gaaacatgctcagcgaatgggagaccgcccgttcccacccaagatctggtcagttgccgc
tggagaacgacatcttcgtgtattcctgcaattggtcaaggaaacagcaatttctgatgg
agattgcttcgttctctcg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GGATGAGGAGCCGGTCGGTGGTGAT 77 515 558 Antisense
TTCCACGTGGCAATGAGCACCCTTA 177 701 617 Antisense
GAAAGTCGCGAGCACGTGGAGCTGA 104 361 685 Antisense
GGATGTACTGGCAAGCCTTCTTCTC 102 515 761 Antisense
CATATTCCCGGATTCTCGTTGTACA 404 215 847 Antisense
TCGATTCCTTCAACGGCAGCAGCGA 629 603 895 Antisense
TGCTCAGCGAATGGGAGACCGCCCG 275 575 924 Antisense
CAAGATCTGGTCAGTTGCCGCTGGA 174 185 957 Antisense
TGCCGCTGGAGAACGACATCTTCGT 416 585 972 Antisense
ACATCTTCGTGTATTCCTGCAATTG 69 107 987 Antisense
TGATGGAGATTGCTTCGTTCTCTCG 475 565 1032 Antisense
Sequence Source Affymetrix Proprietary Database