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[185149_at]

Description C02A12.7 /REP_DB=WormBase Gene ID /WP=CE07831 /TR=O16201 /GB=AAB65263.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 10      4grp_total > 32      6grp_total_sub > Hat      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 73
1 2 3 4 range
A 7
(-3)
A 		10.1
(-2.5)
A 		44.8
(3)
A 		17.6
(-1.3)
A 		38
B 58.4
(-1.8)
A 		56.5
(-3)
A 		65.7
(3)
A 		57.2
(-2.5)
A 		9
C 24.4
(-3)
A 		53.6
(0.1)
A 		65
(1.4)
A 		80.3
(3)
A 		56
avr 29.9
(-3) 		40.1
(-0.9) 		58.5
(3) 		51.7
(1.6) 		29

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 70
1 2 3 4 5 6 range
A 7.9
(-2.6)
A 		56.5
(1.8)
A 		69.9
(3)
A 		3.6
(-3)
A 		15.6
(-1.9)
A 		16.2
(-1.9)
A 		66
B 33
(-0.4)
A 		46.9
(0.9)
A 		5.5
(-3)
A 		9
(-2.7)
A 		68.5
(3)
A 		17.4
(-1.9)
A 		63
C 46.6
(0.6)
A 		73.8
(3)
A 		43.1
(0.3)
A 		15.1
(-2.1)
A 		26
(-1.1)
A 		4.5
(-3)
A 		69
avr 29.2
(-0.6) 		59.1
(3) 		39.5
(0.6) 		9.2
(-3) 		36.7
(0.3) 		12.7
(-2.6) 		50
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 21
1 2 3 4 range
A 2.5
(-2.8)
A 		2.2
(-3)
A 		11.7
(3)
A 		2.6
(-2.7)
A 		10
B 18.6
(3)
A 		13.9
(-1.4)
A 		15.2
(-0.2)
A 		12.2
(-3)
A 		6
C 8.1
(-3)
A 		15.4
(0)
A 		22.7
(3)
A 		13.5
(-0.8)
A 		15
avr 9.7
(-2.7) 		10.5
(-2.1) 		16.5
(3) 		9.4
(-3) 		7

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 27
1 2 3 4 5 6 range
A 1.5
(-2.8)
A 		20.1
(3)
A 		15.2
(1.5)
A 		0.9
(-3)
A 		4.7
(-1.8)
A 		3.9
(-2.1)
A 		19
B 11.5
(-0.7)
A 		15.6
(0.2)
A 		1.3
(-3)
A 		2.4
(-2.8)
A 		27.8
(3)
A 		6.5
(-1.8)
A 		27
C 17.3
(1.5)
A 		22.5
(3)
A 		11
(-0.3)
A 		3
(-2.6)
A 		8.4
(-1)
A 		1.5
(-3)
A 		21
avr 10.1
(-0.2) 		19.4
(3) 		9.2
(-0.5) 		2.1
(-3) 		13.6
(1) 		4
(-2.3) 		17
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 185149_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.15186
Sequence Type Exemplar sequence
Representative Public ID C02A12.7 NCBI
Target Description C02A12.7 /REP_DB=WormBase Gene ID /WP=CE07831 /TR=O16201 /GB=AAB65263.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
SNAP00000023218 ENSEMBL cdna:SNAP chromosome:CEL140:V:3478758:3479275:1 11/11 None
GENEFINDER00000023228 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:3478916:3479275:1 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast T03856 hypothetical protein C02A12.7 - Caenorhabditis elegans 1.0E-39
blast T03856 hypothetical protein C02A12.7 - Caenorhabditis elegans 2.0E-36
blast AAB71024 Hypothetical protein K02E7.2 [Caenorhabditis elegans] ref|NP_493908.1| K02E7.2 [Caenorhabditis elegans] 2.0E-27
blast AAB71024 Hypothetical protein K02E7.2 [Caenorhabditis elegans] ref|NP_493908.1| K02E7.2 [Caenorhabditis elegans] 3.0E-27
blast ABA03108 Hypothetical protein Y55F3C.6 [Caenorhabditis elegans] 4.0E-27
Sequence
Target Sequence 
>C. ELEGANS:185149_AT
tggtgatcaccagccgggaaacaaaggttcattcaattactctccttccaagtgttgtga
atatgctgttcaggaatcatctcaaagtccgattcgatcatgcccgtggtttgtatcgaa
caaaacacgacgaccagataccaccaaaaattgtgctgccaaagcgtccgatcatcgatt
gccagcaattctacca

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TGGTGATCACCAGCCGGGAAACAAA 186 553 14 Antisense
ACAAAGGTTCATTCAATTACTCTCC 544 111 34 Antisense
AATTACTCTCCTTCCAAGTGTTGTG 114 175 48 Antisense
ACTCTCCTTCCAAGTGTTGTGAATA 181 101 52 Antisense
GTTGTGAATATGCTGTTCAGGAATC 273 437 67 Antisense
GCTGTTCAGGAATCATCTCAAAGTC 346 295 78 Antisense
TCATCTCAAAGTCCGATTCGATCAT 706 619 90 Antisense
CAAAACACGACGACCAGATACCACC 42 191 134 Antisense
GACGACCAGATACCACCAAAAATTG 384 375 142 Antisense
TCCGATCATCGATTGCCAGCAATTC 40 595 180 Antisense
TCATCGATTGCCAGCAATTCTACCA 494 621 185 Antisense
Sequence Source Affymetrix Proprietary Database