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[185055_at]

Description C10H11.6 /REP_DB=WormBase Gene ID /WP=CE08095 /TR=P91036 /GB=AAB42350.1 /SUBMIT=ST.LOUIS /CHR=1 /FEA=Sanger Annotation
Cluster 6grp_highest_10_10 > 33      6grp_high1_10_10 > 32      4grp_highest_8_8 > 34      4grp_high_8_8 > 57      6grp_highest_nonorm > 52      6grp_total > 34      4grp_total > 62      6grp_highest_sub > 02      6grp_cgc > 72      6grp_high1_sub > 02_03      6grp_cgc_sub > 02      6grp_total_sub > Decrease      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 1108
1 2 3 4 range
A 1218.9
(3)
P 		543.4
(-1.8)
P 		1169.1
(2.6)
P 		371.8
(-3)
P 		847
B 1388.1
(3)
P 		653.4
(-1)
P 		1169.5
(1.8)
P 		281.2
(-3)
P 		1107
C 1314.2
(2.9)
P 		587.5
(-1.3)
P 		1333.7
(3)
P 		280.6
(-3)
P 		1053
avr 1307.1
(3) 		594.8
(-1.3) 		1224.1
(2.5) 		311.2
(-3) 		996

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 582
1 2 3 4 5 6 range
A 595.1
(-1)
P 		730.3
(0.4)
P 		980.3
(3)
P 		710.8
(0.2)
P 		398.1
(-3)
P 		453
(-2.4)
P 		582
B 724.7
(0.7)
P 		889.9
(3)
P 		574.2
(-1.4)
P 		625.7
(-0.7)
P 		458.1
(-3)
P 		569.9
(-1.4)
P 		432
C 656.5
(0.2)
P 		843.6
(3)
P 		710.9
(1)
P 		576.6
(-0.9)
P 		435.4
(-3)
P 		529.8
(-1.6)
P 		408
avr 658.8
(0.5) 		821.3
(3) 		755.1
(2) 		637.7
(0.2) 		430.5
(-3) 		517.6
(-1.7) 		391
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 418
1 2 3 4 range
A 443.8
(3)
P 		118
(-2)
P 		305.6
(0.9)
P 		54.4
(-3)
P 		389
B 442.7
(3)
P 		161.4
(-1.4)
P 		271
(0.3)
P 		59.9
(-3)
P 		383
C 435.1
(2.6)
P 		168.9
(-1.3)
P 		464.8
(3)
P 		47.3
(-3)
P 		418
avr 440.5
(3) 		149.4
(-1.5) 		347.1
(1.6) 		53.9
(-3) 		387

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 187
1 2 3 4 5 6 range
A 109.7
(-3)
P 		259.7
(3)
P 		213.5
(1.2)
P 		180.3
(-0.2)
P 		120.1
(-2.6)
P 		110.3
(-3)
P 		150
B 252.2
(1.3)
P 		296.2
(3)
P 		139.4
(-3)
P 		165.7
(-2)
P 		186.1
(-1.2)
P 		212.5
(-0.2)
P 		157
C 243.3
(2.4)
P 		257.4
(3)
P 		180.9
(-0.2)
P 		116
(-3)
P 		140.9
(-1.9)
P 		177.3
(-0.4)
P 		141
avr 201.7
(-0.4) 		271.1
(3) 		177.9
(-1.6) 		154
(-2.8) 		149
(-3) 		166.7
(-2.1) 		122
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 185055_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.2462
Sequence Type Exemplar sequence
Representative Public ID C10H11.6 NCBI
Target Description C10H11.6 /REP_DB=WormBase Gene ID /WP=CE08095 /TR=P91036 /GB=AAB42350.1 /SUBMIT=ST.LOUIS /CHR=1 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_059034(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_059034 NCBI Caenorhabditis elegans C10H11.6 (C10H11.6) mRNA, complete cds. 11/11 None
GENEFINDER00000015962 ENSEMBL cdna:GeneFinder chromosome:CEL140:I:4721216:4735230:1 9/11 None
SNAP00000015951 ENSEMBL cdna:SNAP chromosome:CEL140:I:4721321:4723717:1 11/11 None
C10H11.6 ENSEMBL cdna:known chromosome:CEL140:I:4721207:4723961:1 gene:C10H11.6 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrI:4721206-4723717(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Gene Symbol ugt-26
Ensembl C10H11.6
Entrez Gene 172085 Entrez gene
SwissProt P91036 EMBL-EBI
WormBase CE30597 Wormbase
Functional Annotations
Ortholog
ID Title Organism
DROSOPHILA_2:1640109_AT UDP-glycosyltransferase 37b1 dm
DROSGENOME1:145880_AT UDP-glycosyltransferase 37b1 dm
Gene Ontology
GO Biological Process (view graph)
ID Description Evidence Links
8152 metabolism inferred from electronic annotation QuickGO AmiGO
GO Molecular Function (view graph)
ID Description Evidence Links
16758 transferase activity, transferring hexosyl groups inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast AAB42350 Udp-glucuronosyltransferase protein 26 [Caenorhabditis elegans] ref|NP_491435.2| C10H11.6 [Caenorhabditis elegans] 0.0
blast CAE71072 Hypothetical protein CBG17916 [Caenorhabditis briggsae] 0.0
blast CAE71071 Hypothetical protein CBG17915 [Caenorhabditis briggsae] 0.0
blast AAB42345 Udp-glucuronosyltransferase protein 27 [Caenorhabditis elegans] ref|NP_491436.1| C10H11.5 [Caenorhabditis elegans] 0.0
blast AAB42344 Udp-glucuronosyltransferase protein 28 [Caenorhabditis elegans] ref|NP_491437.1| C10H11.4 [Caenorhabditis elegans] 0.0
Protein Domains
Database ID Description E-Value
Pfam IPR002213 EMBL-EBI UDP-glucoronosyl/UDP-glucosyl transferase 9.0E-19
Pfam IPR002213 EMBL-EBI UDP-glucoronosyl/UDP-glucosyl transferase 1.0E-17
Pfam IPR002213 EMBL-EBI UDP-glucoronosyl/UDP-glucosyl transferase 1.8E-15
Pfam IPR002213 EMBL-EBI UDP-glucoronosyl/UDP-glucosyl transferase 2.7E-20
Pfam IPR002213 EMBL-EBI UDP-glucoronosyl/UDP-glucosyl transferase 5.9E-6
Pfam IPR002213 EMBL-EBI UDP-glucoronosyl/UDP-glucosyl transferase 1.3E-18
Pfam IPR002213 EMBL-EBI UDP-glucoronosyl/UDP-glucosyl transferase 8.8E-14
Pfam IPR002213 EMBL-EBI UDP-glucoronosyl/UDP-glucosyl transferase 3.3E-17
Trans Membrane
ID Number Of Domains Domain Boundaries
NP_491435.2 2 7-29,498-520
C10H11.6 2 7-29,498-520
GENEFINDER00000015962 3 509-531,998-1020,1987-2009
SNAP00000015951 1 460-482
Sequence
Target Sequence 
>C. ELEGANS:185055_AT
gaaagccggaatattcgagactatcaaatcaatgccaaatgtcacattcatctggaaata
tgaatccgatgatgtctcgtttgctgatggaatttcaaatattcacttttcaaaatgggt
acctcaaacagctcttctcaatgaccctcggttatccgctttccttacacatggaggtct
cggctcaacaaatgaattggcttattgtgcaaaaccagctgttatggttccaatttacgg
tgatcaaactagaaatgcgaatatgcttgcaagacatggttcagttattgtacttcacaa
gaaggaattggcaaatgtgcaacgagttaaaaaagctgtacatgacattctttacaacaa
acagtacacggaaagtgctgaaagaatagctgaaatgatcaaaaatcaaccaaaaacgcc
aaaagaaactgttgtaagatatactgaatttgtggcaaagtacggaccattccctcaaat
ggctcctcatggccgaaagctcacctatttccagaagacattcctagatatttattccct
gtttgctttaggtgtagttagtgtattaactgttgctttcttagt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GAAAGCCGGAATATTCGAGACTATC 356 359 930 Antisense
TTATCCGCTTTCCTTACACATGGAG 75 681 1081 Antisense
TACACATGGAGGTCTCGGCTCAACA 280 641 1095 Antisense
GTTATGGTTCCAATTTACGGTGATC 510 447 1150 Antisense
GACATGGTTCAGTTATTGTACTTCA 410 369 1202 Antisense
GTGGCAAAGTACGGACCATTCCCTC 427 491 1381 Antisense
CTCAAATGGCTCCTCATGGCCGAAA 69 229 1403 Antisense
GCTCACCTATTTCCAGAAGACATTC 436 301 1428 Antisense
GACATTCCTAGATATTTATTCCCTG 131 369 1446 Antisense
TTATTCCCTGTTTGCTTTAGGTGTA 303 677 1461 Antisense
GTGTATTAACTGTTGCTTTCTTAGT 112 487 1490 Antisense
Sequence Source Affymetrix Proprietary Database