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[185020_at]

Description C33E10.5 /REP_DB=WormBase Gene ID /WP=CE17492 /TR=O61797 /GB=AAC16978.1 /SUBMIT=ST.LOUIS /CHR=X /FEA=Sanger Annotation
Cluster 4grp_high_8_8 > 04      6grp_total > 82      4grp_total > 04      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 123
1 2 3 4 range
A 119.6
(-0.5)
P 		71.8
(-3)
P 		95.6
(-1.8)
A 		187.1
(3)
P 		115
B 120.6
(3)
P 		101.9
(1)
A 		116.4
(2.6)
P 		64
(-3)
A 		57
C 80.9
(-3)
A 		100.1
(-1.3)
P 		92
(-2)
P 		149.6
(3)
P 		69
avr 107
(-0.8) 		91.3
(-3) 		101.3
(-1.6) 		133.6
(3) 		42

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 95
1 2 3 4 5 6 range
A 70
(0.8)
A 		83
(2.1)
A 		79.4
(1.7)
A 		56
(-0.6)
A 		92.3
(3)
A 		31.1
(-3)
A 		61
B 48.2
(-1.6)
A 		73.3
(-0)
A 		62.8
(-0.7)
A 		120.9
(3)
M 		52.8
(-1.3)
A 		26.4
(-3)
A 		95
C 61.2
(-2.6)
A 		94.2
(2)
A 		81.9
(0.3)
A 		101.2
(3)
A 		93.3
(1.9)
A 		58.7
(-3)
P 		43
avr 59.8
(-0.7) 		83.5
(2) 		74.7
(1) 		92.7
(3) 		79.5
(1.5) 		38.7
(-3) 		54
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 30
1 2 3 4 range
A 43.6
(3)
P 		15.6
(-3)
P 		25
(-1)
A 		27.4
(-0.5)
P 		28
B 38.4
(3)
P 		25.2
(-0.2)
A 		27
(0.2)
P 		13.6
(-3)
A 		25
C 26.8
(-1.6)
A 		28.8
(0.1)
P 		32.1
(3)
P 		25.2
(-3)
P 		7
avr 36.3
(3) 		23.2
(-2.5) 		28
(-0.5) 		22.1
(-3) 		14

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 24
1 2 3 4 5 6 range
A 12.9
(-1.5)
A 		29.5
(3)
A 		17.3
(-0.3)
A 		14.2
(-1.2)
A 		27.9
(2.6)
A 		7.6
(-3)
A 		22
B 16.8
(-1.1)
A 		24.4
(0.9)
A 		15.3
(-1.5)
A 		32
(3)
M 		21.4
(0.1)
A 		9.8
(-3)
A 		22
C 22.7
(-1.2)
A 		28.8
(2.2)
A 		20.8
(-2.3)
A 		20.3
(-2.6)
A 		30.2
(3)
A 		19.6
(-3)
P 		11
avr 17.5
(-1) 		27.6
(3) 		17.8
(-0.8) 		22.2
(0.9) 		26.5
(2.6) 		12.3
(-3) 		15
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 185020_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.17522
Sequence Type Exemplar sequence
Representative Public ID C33E10.5 NCBI
Target Description C33E10.5 /REP_DB=WormBase Gene ID /WP=CE17492 /TR=O61797 /GB=AAC16978.1 /SUBMIT=ST.LOUIS /CHR=X /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_078403(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_078403 NCBI Caenorhabditis elegans C33E10.5 (C33E10.5) mRNA, complete cds. 11/11 None
C33E10.5 ENSEMBL cdna:known chromosome:CEL140:X:17272845:17279443:1 gene:C33E10.5 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
GENEFINDER00000003548 8/11 Cross Hyb Matching Probes None
SNAP00000003531 8/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrX:17272844-17279443(+) 99.32 100.0
Public Domain and Genome References
Gene Title
Ensembl C33E10.5
Entrez Gene 183162 Entrez gene
SwissProt O61797 EMBL-EBI
WormBase CE17492 Wormbase
Functional Annotations
Gene Ontology
GO Biological Process (view graph)
ID Description Evidence Links
6096 glycolysis inferred from electronic annotation QuickGO AmiGO
GO Molecular Function (view graph)
ID Description Evidence Links
4365 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast AAC16978 Hypothetical protein C33E10.5 [Caenorhabditis elegans] ref|NP_510804.1| C33E10.5 [Caenorhabditis elegans] 0.0
Sequence
Target Sequence 
>C. ELEGANS:185020_AT
tcacgcctccatcaatcagaaaaccagtcagcaggcctccgcaaaccgaacaaaaattga
gatcagtgttatcaagggagagctgatttctccggaaaggaacggaaactataaagccac
aaaaccaaacccaaaacagagtacatatgtttcgagtgttttccattataaagcagccca
cagtaaatgccacagcaatccaaattggaaacgttcggaaatggcagaaaataggaaaac
agtattatcatgtccacaatttgtgcaaagaagtagaaagctgaaaattaatattgaatt
tttaaccatcaacccatattggtcttacatatatttgggagagctgatttctccagcccg
gaacggaaattatgaagatgtcgtgccaccaagtcaaagaagccaagaacctgccatttt
cggaaatgatgaagattttgcatcaaccagtcagcaagacgatgcccaagagcaagtctt
caccagccataaaaatgttgagaaaggagcgatcaagagggagttaacatctccatcaac
caactgtgc

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TCACGCCTCCATCAATCAGAAAACC 327 627 1194 Antisense
TCAGAAAACCAGTCAGCAGGCCTCC 529 623 1209 Antisense
AGCAGCCCACAGTAAATGCCACAGC 600 77 1365 Antisense
GAATTTTTAACCATCAACCCATATT 614 321 1489 Antisense
TTGGGAGAGCTGATTTCTCCAGCCC 86 709 1528 Antisense
GAAGATGTCGTGCCACCAAGTCAAA 630 337 1567 Antisense
AAGCCAAGAACCTGCCATTTTCGGA 207 147 1593 Antisense
GAAGATTTTGCATCAACCAGTCAGC 275 337 1624 Antisense
ACCAGTCAGCAAGACGATGCCCAAG 156 79 1639 Antisense
GCAAGTCTTCACCAGCCATAAAAAT 437 321 1665 Antisense
TAACATCTCCATCAACCAACTGTGC 516 639 1718 Antisense
Sequence Source Affymetrix Proprietary Database