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[184910_at]

Description C02E7.10 /REP_DB=WormBase Gene ID /WP=CE07847 /TR=O16435 /GB=AAC24169.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 07      4grp_total > 57      6grp_total_sub > Decrease      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 68
1 2 3 4 range
A 15.4
(-2.4)
A 		12.2
(-3)
A 		42.8
(3)
A 		21.7
(-1.1)
A 		31
B 31.5
(-0.7)
A 		73.7
(3)
A 		73.4
(3)
A 		6.1
(-3)
A 		68
C 46.7
(1.3)
A 		44.1
(0.8)
A 		22.4
(-3)
A 		56.5
(3)
A 		34
avr 31.2
(-2) 		43.3
(2) 		46.2
(3) 		28.1
(-3) 		18

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 115
1 2 3 4 5 6 range
A 118.2
(3)
A 		48.4
(-0.7)
A 		75.9
(0.8)
A 		34.8
(-1.4)
A 		37.2
(-1.2)
A 		3.6
(-3)
A 		115
B 110.8
(3)
A 		10
(-2.7)
A 		42.9
(-0.8)
A 		4.8
(-3)
A 		20.2
(-2.1)
A 		9.5
(-2.7)
A 		106
C 104.2
(3)
P 		51.7
(-0.2)
A 		49.8
(-0.3)
A 		29.9
(-1.5)
A 		4.5
(-3)
A 		21.3
(-2)
A 		100
avr 111.1
(3) 		36.7
(-1.5) 		56.2
(-0.3) 		23.2
(-2.3) 		20.6
(-2.5) 		11.5
(-3) 		100
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 17
1 2 3 4 range
A 5.6
(-0.9)
A 		2.6
(-3)
A 		11.2
(3)
A 		3.2
(-2.6)
A 		9
B 10
(0.1)
A 		18.2
(3)
A 		17
(2.6)
A 		1.3
(-3)
A 		17
C 15.5
(3)
A 		12.7
(0.8)
A 		7.8
(-3)
A 		9.5
(-1.7)
A 		8
avr 10.4
(1.7) 		11.2
(2.3) 		12
(3) 		4.7
(-3) 		7

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 38
1 2 3 4 5 6 range
A 21.8
(3)
A 		17.2
(1.7)
A 		16.5
(1.5)
A 		8.8
(-0.7)
A 		11.2
(-0)
A 		0.9
(-3)
A 		21
B 38.6
(3)
A 		3.3
(-2.7)
A 		10.4
(-1.5)
A 		1.3
(-3)
A 		8.2
(-1.9)
A 		3.5
(-2.6)
A 		37
C 38.6
(3)
P 		15.8
(-0.7)
A 		12.7
(-1.2)
A 		6
(-2.3)
A 		1.5
(-3)
A 		7.1
(-2.1)
A 		37
avr 33
(3) 		12.1
(-1.3) 		13.2
(-1.1) 		5.4
(-2.7) 		7
(-2.3) 		3.8
(-3) 		29
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 184910_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.15741
Sequence Type Exemplar sequence
Representative Public ID C02E7.10 NCBI
Target Description C02E7.10 /REP_DB=WormBase Gene ID /WP=CE07847 /TR=O16435 /GB=AAC24169.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_071926(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_071926 NCBI Caenorhabditis elegans C02E7.10 (C02E7.10) mRNA, complete cds. 11/11 None
SNAP00000015186 ENSEMBL cdna:SNAP chromosome:CEL140:V:4930354:4931503:-1 11/11 None
GENEFINDER00000015195 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:4930718:4932841:-1 11/11 None
C02E7.10 ENSEMBL cdna:known chromosome:CEL140:V:4930631:4932841:-1 gene:C02E7.10 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:4930630-4932841(-) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl C02E7.10
Entrez Gene 182116 Entrez gene
SwissProt O16435 EMBL-EBI
WormBase CE36780 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast AAC24169 Hypothetical protein C02E7.10 [Caenorhabditis elegans] ref|NP_504327.2| C02E7.10 [Caenorhabditis elegans] 0.0
blast AAC24169 Hypothetical protein C02E7.10 [Caenorhabditis elegans] ref|NP_504327.2| C02E7.10 [Caenorhabditis elegans] 1.0E-117
blast AAC24169 Hypothetical protein C02E7.10 [Caenorhabditis elegans] ref|NP_504327.2| C02E7.10 [Caenorhabditis elegans] 1.0E-105
blast AAC19247 Downstream of daf-16 (regulated by daf-16) protein 3 [Caenorhabditis elegans] ref|NP_503742.1| Downstream Of DAF-16 (regulated by DAF-16) family member (dod-3) [Caenorhabditis elegans] 2.0E-31
blast AAC19247 Downstream of daf-16 (regulated by daf-16) protein 3 [Caenorhabditis elegans] ref|NP_503742.1| Downstream Of DAF-16 (regulated by DAF-16) family member (dod-3) [Caenorhabditis elegans] 1.0E-30
blast CAB04679 Hypothetical protein T04C12.1 [Caenorhabditis elegans] ref|NP_505815.1| T04C12.1 [Caenorhabditis elegans] 2.0E-29
blast CAB04679 Hypothetical protein T04C12.1 [Caenorhabditis elegans] ref|NP_505815.1| T04C12.1 [Caenorhabditis elegans] 1.0E-28
Protein Domains
Trans Membrane
ID Number Of Domains Domain Boundaries
GENEFINDER00000015195 1 87-109
Sequence
Target Sequence 
>C. ELEGANS:184910_AT
aagacgtccgacaatggctcaacattgcgttgaaaattgctcctggcctatttctatgcc
aaaacccagaaatcgattctgaatctcttgttcatttatggtgtagcagtgcgtttagag
ctgtaaagaacgagataaaaaagatggatccattgttcccgtcagagttgtcaccattgt
taacagtcatcagtaagaagttgatgagcaatgaatgtgatcaaggaaaagccaaaaatg
caatgtgttgcgtcacgctgctactctctgaagagcgccgtccgatatttgatgatcttc
tggattggctgaatctcaccgcttcatcttcaaagcttccaaatcttcaagccacttttc
gattgagatgcaagggttctcagccaaatttggatttgattctggagaaattgatcccat
acttgttcccg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
AAGACGTCCGACAATGGCTCAACAT 703 153 695 Antisense
TTGCGTTGAAAATTGCTCCTGGCCT 650 701 719 Antisense
GCTCCTGGCCTATTTCTATGCCAAA 346 299 733 Antisense
CCCGTCAGAGTTGTCACCATTGTTA 574 259 852 Antisense
CAATGTGTTGCGTCACGCTGCTACT 463 183 935 Antisense
CGCTGCTACTCTCTGAAGAGCGCCG 379 255 950 Antisense
GAGCGCCGTCCGATATTTGATGATC 617 385 967 Antisense
TCTGGATTGGCTGAATCTCACCGCT 530 607 993 Antisense
TCACCGCTTCATCTTCAAAGCTTCC 124 625 1010 Antisense
TCCAAATCTTCAAGCCACTTTTCGA 184 589 1032 Antisense
GAAATTGATCCCATACTTGTTCCCG 141 365 1101 Antisense
Sequence Source Affymetrix Proprietary Database