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[184909_at]

Description C32B5.11 /REP_DB=WormBase Gene ID /WP=CE08519 /TR=P91105 /GB=AAB37965.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_total > 32      4grp_total > 38      6grp_total_sub > Hat      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 43
1 2 3 4 range
A 22
(3)
A 		1.9
(-2.9)
A 		1.6
(-3)
A 		7.7
(-1.2)
A 		20
B 7.4
(-0.3)
A 		11.2
(2.5)
A 		3.9
(-3)
A 		11.8
(3)
A 		8
C 44.9
(3)
A 		23.6
(-0.1)
A 		3.6
(-3)
A 		8.1
(-2.3)
A 		41
avr 24.8
(3) 		12.2
(-0.5) 		3
(-3) 		9.2
(-1.3) 		22

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 41
1 2 3 4 5 6 range
A 24.9
(0.3)
A 		42.9
(3)
A 		33.3
(1.6)
A 		2.2
(-3)
A 		4
(-2.7)
A 		4.2
(-2.7)
A 		41
B 19.2
(-0.9)
A 		26.4
(0.7)
A 		36.6
(3)
A 		9.8
(-3)
A 		14.8
(-1.9)
A 		14.7
(-1.9)
A 		27
C 29.4
(1.5)
A 		2.9
(-2.9)
A 		22.7
(0.4)
A 		38.4
(3)
A 		2.3
(-3)
A 		7.2
(-2.2)
A 		36
avr 24.5
(1.4) 		24.1
(1.3) 		30.9
(3) 		16.8
(-0.5) 		7
(-3) 		8.7
(-2.6) 		24
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 15
1 2 3 4 range
A 8
(3)
A 		0.4
(-3)
A 		0.4
(-3)
A 		1.1
(-2.4)
A 		8
B 2.3
(1.4)
A 		2.8
(3)
A 		0.9
(-3)
A 		2.5
(2.1)
A 		2
C 14.9
(3)
A 		6.8
(-0.6)
A 		1.3
(-3)
A 		1.4
(-3)
A 		14
avr 8.4
(3) 		3.3
(-1.1) 		0.9
(-3) 		1.7
(-2.4) 		8

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 15
1 2 3 4 5 6 range
A 4.6
(-1.4)
A 		15.3
(3)
A 		7.3
(-0.3)
A 		0.6
(-3)
A 		1.2
(-2.8)
A 		1
(-2.8)
A 		15
B 6.7
(0.9)
A 		8.8
(2.9)
A 		8.9
(3)
A 		2.6
(-3)
A 		6
(0.2)
A 		5.5
(-0.2)
A 		6
C 10.9
(3)
A 		0.9
(-2.9)
A 		5.8
(-0)
A 		7.7
(1.1)
A 		0.7
(-3)
A 		2.4
(-2)
A 		10
avr 7.4
(2.1) 		8.3
(3) 		7.3
(1.9) 		3.6
(-1.9) 		2.6
(-3) 		3
(-2.6) 		6
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 184909_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.5946
Sequence Type Exemplar sequence
Representative Public ID C32B5.11 NCBI
Target Description C32B5.11 /REP_DB=WormBase Gene ID /WP=CE08519 /TR=P91105 /GB=AAB37965.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_061460(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_061460 NCBI Caenorhabditis elegans C32B5.11 (C32B5.11) mRNA, complete cds. 11/11 None
C32B5.11 ENSEMBL cdna:known chromosome:CEL140:II:948450:949653:-1 gene:C32B5.11 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:949202-949652(-) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl C32B5.11
Entrez Gene 183114 Entrez gene
SwissProt P91105 EMBL-EBI
WormBase CE08519 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast NP_493861 C32B5.11 [Caenorhabditis elegans] gb|AAB37965.1| Hypothetical protein C32B5.11 [Caenorhabditis elegans] 9.0E-62
Sequence
Target Sequence 
>C. ELEGANS:184909_AT
aatgctcggtgttgttagcgtccatttcgtgaataatggagatcctgctccatgctattc
gcgacattggaaccggaacttggaattattggatcagaaggcggaatcgttttggagcaa
gttccgagtactccttgatcccaaaagcattccattcaaatccctggagctcaatggctc
gatttctatagacgataacgtcattcaatcttctgagctccttattcacaatggaagact
tgatgagaatattgacctagaattcgaaaaactattgaagctcgcgaatcaacaagtcga
gctgaccacggtt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
AATGCTCGGTGTTGTTAGCGTCCAT 221 165 24 Antisense
GTTGTTAGCGTCCATTTCGTGAATA 429 435 34 Antisense
TGCTATTCGCGACATTGGAACCGGA 516 575 76 Antisense
GAAGGCGGAATCGTTTTGGAGCAAG 72 331 120 Antisense
GGAGCAAGTTCCGAGTACTCCTTGA 507 515 137 Antisense
GAGTACTCCTTGATCCCAAAAGCAT 459 399 149 Antisense
CAAAAGCATTCCATTCAAATCCCTG 442 189 165 Antisense
AATCCCTGGAGCTCAATGGCTCGAT 105 169 182 Antisense
AACGTCATTCAATCTTCTGAGCTCC 218 145 220 Antisense
TCTTCTGAGCTCCTTATTCACAATG 623 617 232 Antisense
TCAACAAGTCGAGCTGACCACGGTT 513 629 312 Antisense
Sequence Source Affymetrix Proprietary Database