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[184763_s_at]

Description Y111B2A.I /REP_DB=WormBase Gene ID /WP=CE24132 /TR=Q9NEL9 /GB=CAB81961.1 /SUBMIT=HINXTON /CHR=3 /FEA=Sanger Annotation
Cluster 6grp_total > 60      4grp_total > 44      6grp_total_sub > Hat      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 49
1 2 3 4 range
A 70.5
(1.9)
P 		77.6
(3)
P 		38.5
(-3)
A 		41.8
(-2.5)
A 		39
B 69.6
(2.5)
P 		72.6
(3)
A 		42
(-2.3)
A 		38.1
(-3)
A 		35
C 62.4
(-2.6)
M 		65.3
(-1.9)
A 		60.5
(-3)
A 		86.9
(3)
A 		26
avr 67.5
(2) 		71.8
(3) 		47
(-3) 		55.6
(-0.9) 		25

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 64
1 2 3 4 5 6 range
A 49.9
(1.8)
M 		49.6
(1.7)
P 		44
(-0.2)
A 		53.5
(3)
A 		35.5
(-3)
A 		51.8
(2.4)
A 		18
B 60.1
(2.3)
A 		18.3
(-3)
A 		65.5
(3)
P 		42.2
(0)
A 		36.7
(-0.7)
A 		33
(-1.1)
A 		47
C 35.8
(-3)
A 		61.3
(0.3)
M 		54.9
(-0.5)
P 		82.2
(3)
P 		41.2
(-2.3)
A 		48.4
(-1.4)
P 		46
avr 48.6
(0) 		43.1
(-1.5) 		54.8
(1.7) 		59.3
(3) 		37.8
(-3) 		44.4
(-1.2) 		22
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 20
1 2 3 4 range
A 25.7
(3)
P 		16.8
(0.3)
P 		10.1
(-1.8)
A 		6.1
(-3)
A 		20
B 22.2
(3)
P 		17.9
(1.2)
A 		9.7
(-2.3)
A 		8.1
(-3)
A 		14
C 20.7
(2.6)
M 		18.8
(0.9)
A 		21.1
(3)
A 		14.6
(-3)
A 		7
avr 22.9
(3) 		17.8
(0.7) 		13.6
(-1.2) 		9.6
(-3) 		13

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 15
1 2 3 4 5 6 range
A 9.2
(-3)
M 		17.7
(3)
P 		9.6
(-2.7)
A 		13.6
(0.1)
A 		10.7
(-1.9)
A 		12.6
(-0.6)
A 		9
B 20.9
(3)
A 		6.1
(-3)
A 		15.9
(1)
P 		11.2
(-0.9)
A 		14.9
(0.6)
A 		12.3
(-0.5)
A 		15
C 13.3
(-3)
A 		18.7
(3)
M 		14
(-2.2)
P 		16.5
(0.6)
P 		13.3
(-3)
A 		16.2
(0.2)
P 		5
avr 14.5
(3) 		14.2
(1.8) 		13.2
(-2.2) 		13.8
(0.2) 		13
(-3) 		13.7
(-0.2) 		2
NetAffx Links Cluster Members
Consensus/Exemplar
Group Members
GeneChip Array Information
Probe Set ID 184763_s_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.18964
Sequence Type Exemplar sequence
Representative Public ID Y111B2A.I NCBI
Target Description Y111B2A.I /REP_DB=WormBase Gene ID /WP=CE24132 /TR=Q9NEL9 /GB=CAB81961.1 /SUBMIT=HINXTON /CHR=3 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
GENEFINDER00000006278 ENSEMBL cdna:GeneFinder chromosome:CEL140:III:12535351:12536949:1 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrIII:12535346-12536945(+) 100.0 100.0
Sequence
Target Sequence 
>C. ELEGANS:184763_S_AT
atttgtctacgatcgcaagaaaaatcgacaaataggcggatacggaggcggttatggctc
cggcggaggtgatggtggagcatcctatcaccagccgtacaatcaggatcagagacgtgg
tggacgaggtggcggtcctccaaaatatcagagatcaccgtatcgaggtggccgagggcg
acgga

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
ATTTGTCTACGATCGCAAGAAAAAT 526 15 237 Antisense
CAAATAGGCGGATACGGAGGCGGTT 258 111 265 Antisense
TACGGAGGCGGTTATGGCTCCGGCG 312 647 277 Antisense
GCGGTTATGGCTCCGGCGGAGGTGA 96 291 284 Antisense
GGCTCCGGCGGAGGTGATGGTGGAG 9 539 292 Antisense
ATGGTGGAGCATCCTATCACCAGCC 517 49 308 Antisense
ACGAGGTGGCGGTCCTCCAAAATAT 82 91 360 Antisense
GTGGCGGTCCTCCAAAATATCAGAG 114 493 365 Antisense
AAAATATCAGAGATCACCGTATCGA 518 133 378 Antisense
CGTATCGAGGTGGCCGAGGGCGACG 315 245 395 Antisense
TATCGAGGTGGCCGAGGGCGACGGA 554 651 397 Antisense
Sequence Source Affymetrix Proprietary Database