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[184762_at]

Description Y111B2A.I /REP_DB=WormBase Gene ID /WP=CE24132 /TR=Q9NEL9 /GB=CAB81961.1 /SUBMIT=HINXTON /CHR=3 /FEA=Sanger Annotation
Cluster 6grp_total > 16      4grp_total > 06      6grp_total_sub > Decrease      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 113
1 2 3 4 range
A 68.9
(3)
P 		25
(-3)
A 		56.9
(1.4)
A 		58.1
(1.5)
A 		44
B 83.5
(3)
P 		50.1
(-0.9)
A 		32.7
(-3)
A 		36.9
(-2.5)
A 		51
C 31.2
(-3)
A 		32
(-3)
A 		45.6
(-2.2)
A 		138.2
(3)
P 		107
avr 61.2
(0.6) 		35.7
(-3) 		45.1
(-1.7) 		77.7
(3) 		42

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 127
1 2 3 4 5 6 range
A 53.5
(2.8)
A 		55
(3)
A 		6.4
(-3)
A 		54.2
(2.9)
A 		32
(0.2)
A 		49.6
(2.3)
P 		49
B 30.9
(-0.3)
A 		60.8
(3)
A 		6.4
(-3)
A 		24.3
(-1)
A 		21.9
(-1.3)
A 		18.1
(-1.7)
A 		54
C 132.9
(3)
M 		82.4
(0.5)
P 		60
(-0.6)
P 		10.4
(-3)
A 		69.5
(-0.1)
P 		21.1
(-2.5)
A 		123
avr 72.4
(3) 		66.1
(2.2) 		24.3
(-3) 		29.6
(-2.3) 		41.1
(-0.9) 		29.6
(-2.3) 		48
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 21
1 2 3 4 range
A 25.1
(3)
P 		5.4
(-3)
A 		14.9
(-0.1)
A 		8.5
(-2.1)
A 		20
B 26.6
(3)
P 		12.4
(-1.5)
A 		7.6
(-3)
A 		7.9
(-2.9)
A 		19
C 10.3
(-2.5)
A 		9.2
(-3)
A 		15.9
(-0.1)
A 		23.3
(3)
P 		14
avr 20.7
(3) 		9
(-3) 		12.8
(-1.1) 		13.2
(-0.8) 		12

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 48
1 2 3 4 5 6 range
A 9.9
(-0.2)
A 		19.5
(3)
A 		1.4
(-3)
A 		13.7
(1.1)
A 		9.6
(-0.3)
A 		12.1
(0.5)
P 		18
B 10.7
(-0.1)
A 		20.2
(3)
A 		1.6
(-3)
A 		6.4
(-1.5)
A 		8.9
(-0.6)
A 		6.8
(-1.3)
A 		19
C 49.3
(3)
M 		25.1
(-0.1)
P 		15.3
(-1.3)
P 		2.1
(-3)
A 		22.5
(-0.4)
P 		7.1
(-2.4)
A 		47
avr 23.3
(3) 		21.6
(2.4) 		6.1
(-3) 		7.4
(-2.5) 		13.7
(-0.3) 		8.7
(-2.1) 		17
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 184762_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.18964
Sequence Type Exemplar sequence
Representative Public ID Y111B2A.I NCBI
Target Description Y111B2A.I /REP_DB=WormBase Gene ID /WP=CE24132 /TR=Q9NEL9 /GB=CAB81961.1 /SUBMIT=HINXTON /CHR=3 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
GENEFINDER00000006278 ENSEMBL cdna:GeneFinder chromosome:CEL140:III:12535351:12536949:1 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrIII:12535346-12536945(+) 100.0 100.0
Sequence
Target Sequence 
>C. ELEGANS:184762_AT
aacttgattgaaccagcgggatctgacatgattatcgcccggaaaaaatttgcaacttca
gaaattgtggagacgaagaaggtgctgctacatcacgaaaaaaccaacctgagttggcaa
aggttcagtgtgaaagacaccagcgaaacagcacggaaaaagttacaacttcagaaatta
tggagacaaagaagcctagcagctttggttctgtttggatttgtctacgatcgcaagaaa
aatcgacaaataggcggatacggaggcggttatggctccggcggaggtgatggtggagca
tcctatcaccagccgtacaatcaggatcagagacgtggtggacgaggtggcggtcctcca
aaatatcagagatcaccgtatcgaggtggccgagggcgacggagaagtttcagaagttca
gaagaaaagtttagaacattttcagaaattgtttttttgcccaaaaaaggacagtacgaa
ttgggcaaaaatgaaaggttcctaatattgttaaaaacgggtaattcatatatggagaat
tcagaaatactaggtacttgtccttcaa

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
AACTTGATTGAACCAGCGGGATCTG 647 137 19 Antisense
GGGATCTGACATGATTATCGCCCGG 47 497 36 Antisense
TATCGCCCGGAAAAAATTTGCAACT 528 627 51 Antisense
GAAGAAGGTGCTGCTACATCACGAA 172 341 93 Antisense
GCTACATCACGAAAAAACCAACCTG 93 301 105 Antisense
AAGACACCAGCGAAACAGCACGGAA 638 151 152 Antisense
ATGGAGACAAAGAAGCCTAGCAGCT 49 53 198 Antisense
GCCTAGCAGCTTTGGTTCTGTTTGG 426 281 212 Antisense
GGTTCTGTTTGGATTTGTCTACGAT 701 505 225 Antisense
CGAGGGCGACGGAGAAGTTTCAGAA 76 1 409 Antisense
GAAATACTAGGTACTTGTCCTTCAA 442 363 562 Antisense
Sequence Source Affymetrix Proprietary Database