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[184658_at]

Description C33C12.2 /REP_DB=WormBase Gene ID /WP=CE08550 /TR=O16583 /GB=AAB66062.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_total > 80      4grp_total > 03      6grp_total_sub > Hat      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 35
1 2 3 4 range
A 3.1
(-3)
A 		7.5
(-2.3)
A 		30.9
(1.7)
A 		38.3
(3)
A 		35
B 18.6
(-0)
A 		11.5
(-1.7)
A 		6
(-3)
A 		31.3
(3)
A 		25
C 28.4
(1.8)
A 		24.4
(1)
A 		4.2
(-3)
A 		34.5
(3)
A 		30
avr 16.7
(-2.1) 		14.5
(-2.8) 		13.7
(-3) 		34.7
(3) 		21

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 37
1 2 3 4 5 6 range
A 2.8
(-2.8)
A 		2.3
(-2.9)
A 		1.8
(-3)
A 		39.1
(3)
A 		6.9
(-2.2)
A 		4.6
(-2.5)
A 		37
B 7
(3)
A 		6.1
(1.9)
A 		2.1
(-3)
A 		2.1
(-3)
A 		5.9
(1.7)
A 		5.6
(1.3)
A 		5
C 6
(3)
A 		3.3
(-3)
A 		3.6
(-2.3)
A 		4.2
(-1)
A 		5.5
(1.9)
A 		5.9
(2.8)
A 		3
avr 5.3
(-1.7) 		3.9
(-2.3) 		2.5
(-3) 		15.1
(3) 		6.1
(-1.3) 		5.4
(-1.6) 		13
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 8
1 2 3 4 range
A 1.1
(-3)
A 		1.6
(-2.6)
A 		8.1
(3)
A 		5.6
(0.9)
A 		7
B 5.9
(2.1)
A 		2.8
(-1.4)
A 		1.4
(-3)
A 		6.7
(3)
A 		5
C 9.4
(3)
A 		7
(1.2)
A 		1.5
(-3)
A 		5.8
(0.3)
A 		8
avr 5.5
(1.7) 		3.8
(-2.7) 		3.7
(-3) 		6
(3) 		2

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 10
1 2 3 4 5 6 range
A 0.5
(-2.9)
A 		0.8
(-2.7)
A 		0.4
(-3)
A 		9.9
(3)
A 		2.1
(-1.9)
A 		1.1
(-2.6)
A 		10
B 2.4
(3)
A 		2
(1.7)
A 		0.5
(-3)
A 		0.6
(-2.7)
A 		2.4
(3)
A 		2.1
(2.1)
A 		2
C 2.2
(3)
A 		1
(-2.1)
A 		0.9
(-2.6)
A 		0.8
(-3)
A 		1.8
(1.3)
A 		2
(2.1)
A 		1
avr 1.7
(-0.9) 		1.3
(-1.7) 		0.6
(-3) 		3.8
(3) 		2.1
(-0.2) 		1.7
(-0.9) 		3
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 184658_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.4666
Sequence Type Exemplar sequence
Representative Public ID C33C12.2 NCBI
Target Description C33C12.2 /REP_DB=WormBase Gene ID /WP=CE08550 /TR=O16583 /GB=AAB66062.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
SNAP00000027204 ENSEMBL cdna:SNAP chromosome:CEL140:II:2170464:2194141:1 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:2192719-2194140(+) 80.12 100.0
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast NP_494207 C33C12.3 [Caenorhabditis elegans] gb|AAB66056.2| Hypothetical protein C33C12.3 [Caenorhabditis elegans] 0.0
blast CAE70469 Hypothetical protein CBG17056 [Caenorhabditis briggsae] 0.0
blast CAE70464 Hypothetical protein CBG17050 [Caenorhabditis briggsae] 0.0
Protein Domains
Database ID Description E-Value
Pfam IPR001139 EMBL-EBI Glycoside hydrolase, family 30 1.0E-126
Sequence
Target Sequence 
>C. ELEGANS:184658_AT
aatttcccaaattattcctgattgaaaagctcattcatcgcgtcgttaacaatccgtttt
caaccgaatcaggtcgatatggggctcaaattttgggaaatattgcgaggaatttgaatt
ttctagttaaaattttccaaattttcgggaataatctgaaagttagggtttcagttgaaa
attttggcacaaaaaactcacaatttgcctatcactatcagatccttgtggttgctgagc
tcccggagccccggcaactgtcggctgctgctgctgcgtgggccgattgtgaacggcgac
cgttatcgtttgaacttcca

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
AATTTCCCAAATTATTCCTGATTGA 579 173 164 Antisense
AAAGCTCATTCATCGCGTCGTTAAC 35 125 189 Antisense
TCATCGCGTCGTTAACAATCCGTTT 605 619 198 Antisense
CAATCCGTTTTCAACCGAATCAGGT 596 179 213 Antisense
ATCAGGTCGATATGGGGCTCAAATT 485 27 231 Antisense
AAAACTCACAATTTGCCTATCACTA 397 131 356 Antisense
TTTGCCTATCACTATCAGATCCTTG 198 669 367 Antisense
CAGATCCTTGTGGTTGCTGAGCTCC 68 207 382 Antisense
TGCTGCGTGGGCCGATTGTGAACGG 390 579 435 Antisense
GGGCCGATTGTGAACGGCGACCGTT 166 493 443 Antisense
GCGACCGTTATCGTTTGAACTTCCA 602 289 459 Antisense
Sequence Source Affymetrix Proprietary Database