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[184580_at]

Description T02G5.10 /REP_DB=WormBase Gene ID /WP=CE04862 /TR=Q22102 /GB=AAA82399.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_total > 54      4grp_total > 0      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 41
1 2 3 4 range
A 21.8
(0.6)
A 		11.7
(-3)
A 		13.6
(-2.3)
A 		28.6
(3)
A 		17
B 30.7
(2.4)
A 		3.3
(-3)
A 		33.5
(3)
A 		13.8
(-0.9)
A 		30
C 1.6
(-3)
A 		30
(1.2)
A 		27.9
(0.9)
A 		42.3
(3)
A 		41
avr 18
(-1.6) 		15
(-3) 		25
(1.5) 		28.2
(3) 		13

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 32
1 2 3 4 5 6 range
A 12.3
(-0.5)
A 		16.1
(0.7)
A 		23.5
(3)
A 		11.8
(-0.7)
A 		4.4
(-3)
A 		6.5
(-2.3)
A 		19
B 5.1
(-2.6)
A 		3.2
(-3)
A 		33.4
(3)
A 		11.5
(-1.4)
A 		21.6
(0.7)
A 		28.8
(2.1)
A 		30
C 11.9
(-0.9)
A 		31
(3)
A 		2.7
(-2.8)
A 		1.9
(-3)
A 		23.6
(1.5)
A 		14.2
(-0.5)
A 		29
avr 9.8
(-2.3) 		16.8
(1.4) 		19.9
(3) 		8.4
(-3) 		16.5
(1.2) 		16.5
(1.2) 		12
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 9
1 2 3 4 range
A 7.9
(3)
A 		2.5
(-3)
A 		3.6
(-1.8)
A 		4.2
(-1.1)
A 		5
B 9.8
(3)
A 		0.8
(-3)
A 		7.8
(1.7)
A 		2.9
(-1.6)
A 		9
C 0.5
(-3)
A 		8.6
(2.3)
A 		9.7
(3)
A 		7.1
(1.3)
A 		9
avr 6.1
(1.2) 		4
(-3) 		7
(3) 		4.7
(-1.6) 		3

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 10
1 2 3 4 5 6 range
A 2.3
(-1.6)
A 		5.7
(3)
A 		5.1
(2.2)
A 		3
(-0.7)
A 		1.3
(-3)
A 		1.6
(-2.6)
A 		4
B 1.8
(-2.6)
A 		1.1
(-3)
A 		8.1
(1.3)
A 		3.1
(-1.8)
A 		8.8
(1.8)
A 		10.8
(3)
A 		10
C 4.4
(-0.4)
A 		9.5
(3)
A 		0.7
(-2.8)
A 		0.4
(-3)
A 		7.6
(1.7)
A 		4.7
(-0.2)
A 		9
avr 2.8
(-2) 		5.4
(2.2) 		4.6
(0.9) 		2.2
(-3) 		5.9
(3) 		5.7
(2.7) 		4
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 184580_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.5700
Sequence Type Exemplar sequence
Representative Public ID T02G5.10 NCBI
Target Description T02G5.10 /REP_DB=WormBase Gene ID /WP=CE04862 /TR=Q22102 /GB=AAA82399.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Design Representative Id based pipeline to a Affymetrix Proprietary Database identifier using 1 transcript(s).
Annotation Grade This is a grade R annotation.
Annotation Transcript Cluster (# of Matching Probes) T02G5.10
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
T02G5.10 T02G5.10 /REP_DB=WormBase Gene ID /WP=CE04862 /TR=Q22102 /GB=AAA82399.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
NM_063051 1/11 Cross Hyb Matching Probes None
NM_063059 1/11 Cross Hyb Matching Probes None
ZK1127.1 1/11 Cross Hyb Matching Probes None
T02G5.11 1/11 Cross Hyb Matching Probes A 
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:7077359-7077976(-) 26.06 100.0
Sequence
Target Sequence 
>C. ELEGANS:184580_AT
atgaagcatcctacctatgccatgattgctagttgggcagcttgtttcagatatgttgac
tttccagccatatttgggcctgaagatactttattgagttacccgttcatagcctttatt
gattcatctcatttcttcaccag

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
ATGAAGCATCCTACCTATGCCATGA 243 43 13 Antisense
TCCTACCTATGCCATGATTGCTAGT 119 589 21 Antisense
GATTGCTAGTTGGGCAGCTTGTTTC 181 435 36 Antisense
GTTGGGCAGCTTGTTTCAGATATGT 283 437 44 Antisense
GTTTCAGATATGTTGACTTTCCAGC 292 449 56 Antisense
GACTTTCCAGCCATATTTGGGCCTG 182 373 70 Antisense
GCCATATTTGGGCCTGAAGATACTT 243 281 79 Antisense
GATACTTTATTGAGTTACCCGTTCA 136 185 97 Antisense
GTTACCCGTTCATAGCCTTTATTGA 318 425 110 Antisense
CATAGCCTTTATTGATTCATCTCAT 170 215 120 Antisense
TTGATTCATCTCATTTCTTCACCAG 399 707 131 Antisense
Sequence Source Affymetrix Proprietary Database