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[184511_at]

Description K11H12.5 /REP_DB=WormBase Gene ID /WP=CE18054 /TR=P91368 /GB=AAC24404.1 /SUBMIT=ST.LOUIS /CHR=4 /FEA=Sanger Annotation
Cluster 6grp_highest_10_10 > 46      6grp_high1_10_10 > 64      4grp_high_8_8 > 09      6grp_highest_nonorm > 90      6grp_total > 44      4grp_total > 23      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 145
1 2 3 4 range
A 150
(0.9)
P 		76.9
(-2.1)
P 		56.2
(-3)
A 		200.9
(3)
P 		145
B 196.9
(3)
P 		56.3
(-3)
P 		90.2
(-1.6)
P 		108.2
(-0.8)
P 		141
C 141.8
(3)
P 		115.2
(0.9)
P 		66.6
(-3)
P 		96.2
(-0.6)
P 		75
avr 162.9
(3) 		82.8
(-2.2) 		71
(-3) 		135.1
(1.2) 		92

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 185
1 2 3 4 5 6 range
A 181.8
(-0.1)
P 		99.8
(-3)
P 		270.2
(3)
P 		119.9
(-2.3)
P 		102.9
(-2.9)
P 		171.9
(-0.5)
P 		170
B 243.9
(1.9)
P 		139.8
(-1.9)
P 		274.2
(3)
P 		119.4
(-2.7)
P 		111
(-3)
P 		206.6
(0.5)
P 		163
C 175.3
(1.3)
P 		162.6
(0.6)
P 		210.7
(3)
P 		187.6
(1.9)
P 		89.2
(-3)
P 		154.8
(0.2)
P 		122
avr 200.3
(1) 		134.1
(-1.7) 		251.7
(3) 		142.3
(-1.4) 		101
(-3) 		177.8
(0.1) 		151
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 49
1 2 3 4 range
A 54.6
(3)
P 		16.7
(-2.7)
P 		14.7
(-3)
A 		29.4
(-0.8)
P 		40
B 62.8
(3)
P 		13.9
(-3)
P 		20.9
(-2.1)
P 		23.1
(-1.9)
P 		49
C 47
(3)
P 		33.1
(0.3)
P 		23.2
(-1.6)
P 		16.2
(-3)
P 		31
avr 54.8
(3) 		21.2
(-2.7) 		19.6
(-3) 		22.9
(-2.4) 		35

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 56
1 2 3 4 5 6 range
A 33.5
(-2.3)
P 		35.5
(-1.9)
P 		58.8
(3)
P 		30.4
(-3)
P 		31
(-2.9)
P 		41.9
(-0.6)
P 		28
B 84.9
(3)
P 		46.5
(-1.3)
P 		66.6
(0.9)
P 		31.6
(-3)
P 		45.1
(-1.5)
P 		77.1
(2.1)
P 		53
C 65
(3)
P 		49.6
(0.4)
P 		53.6
(1.1)
P 		37.7
(-1.5)
P 		28.9
(-3)
P 		51.8
(0.8)
P 		36
avr 61.1
(3) 		43.9
(-0.7) 		59.7
(2.7) 		33.2
(-3) 		35
(-2.6) 		56.9
(2.1) 		28
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 184511_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.11248
Sequence Type Exemplar sequence
Representative Public ID K11H12.5 NCBI
Target Description K11H12.5 /REP_DB=WormBase Gene ID /WP=CE18054 /TR=P91368 /GB=AAC24404.1 /SUBMIT=ST.LOUIS /CHR=4 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_067569(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_067569 NCBI Caenorhabditis elegans K11H12.5 (K11H12.5) mRNA, complete cds. 11/11 None
K11H12.5 ENSEMBL cdna:known chromosome:CEL140:IV:677616:679171:1 gene:K11H12.5 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrIV:677621-679177(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl K11H12.5
Entrez Gene 187312 Entrez gene
SwissProt P91368 EMBL-EBI
WormBase CE18054 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast NP_499970 K11H12.5 [Caenorhabditis elegans] gb|AAC24404.1| Hypothetical protein K11H12.5 [Caenorhabditis elegans] 1.0E-165
Sequence
Target Sequence 
>C. ELEGANS:184511_AT
gagctgaccgtgtttttgtatgatggaatttcgaatgattttccaaaacaagccgtcggt
aaatgtcattctgtgatatctctcaagcaaagtaggcatactgctgttaacacctcggac
ggattatttgagcaagtttttcacatttgccaactgtacaatgcgactttcacatcaccg
atcaaggattggatggccagctcaaaaaatggtgaccttcctgaaaacgcagataccatg
aagctcgtcattgctcgtccatcggagctcctaaactctgcgagcacattacgatcgttt
aacgacattgttgcaaaagatccgcggattctgaatctaatggaagctttcaaagttatc
gagaataaagctagaattgacaaagatgacaattcaagaggaatgctgtacctttgtgtt
aaaa

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GAGCTGACCGTGTTTTTGTATGATG 389 387 334 Antisense
CAAGCCGTCGGTAAATGTCATTCTG 598 185 382 Antisense
GTCATTCTGTGATATCTCTCAAGCA 80 469 398 Antisense
AGGCATACTGCTGTTAACACCTCGG 526 51 427 Antisense
GCAAGTTTTTCACATTTGCCAACTG 195 309 465 Antisense
GCCAACTGTACAATGCGACTTTCAC 170 279 482 Antisense
CGACTTTCACATCACCGATCAAGGA 592 251 497 Antisense
AATGGTGACCTTCCTGAAAACGCAG 631 161 541 Antisense
CATCGGAGCTCCTAAACTCTGCGAG 53 213 593 Antisense
AACTCTGCGAGCACATTACGATCGT 286 141 607 Antisense
GGAATGCTGTACCTTTGTGTTAAAA 516 531 733 Antisense
Sequence Source Affymetrix Proprietary Database