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[184387_at]

Description H32C10.1 /REP_DB=WormBase Gene ID /WP=CE21003 /TR=Q9TYQ4 /GB=AAD12799.1 /SUBMIT=ST.LOUIS /CHR=4 /FEA=Sanger Annotation
Cluster 6grp_total > 88      4grp_total > 45      6grp_total_sub > Increase      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 58
1 2 3 4 range
A 58.4
(2)
A 		26.5
(-3)
A 		43
(-0.4)
A 		64.8
(3)
A 		38
B 50.2
(2.2)
A 		56.9
(3)
A 		35.2
(0.4)
A 		6.9
(-3)
A 		50
C 43.9
(3)
A 		39
(2.1)
A 		14.6
(-2.1)
A 		9.5
(-3)
A 		34
avr 50.8
(3) 		40.8
(0.5) 		30.9
(-2) 		27.1
(-3) 		24

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 118
1 2 3 4 5 6 range
A 28.3
(-1.7)
A 		50.4
(-0.2)
A 		8.6
(-3)
A 		76.8
(1.6)
A 		60.8
(0.5)
A 		97.5
(3)
M 		89
B 29
(-1.8)
A 		26.2
(-1.9)
A 		38.9
(-1.3)
A 		5.2
(-3)
A 		75
(0.6)
P 		122.8
(3)
P 		118
C 34.4
(-1.6)
A 		36.9
(-1.4)
A 		11.2
(-3)
A 		27.6
(-2)
A 		73.3
(0.9)
A 		107.3
(3)
P 		96
avr 30.6
(-2.3) 		37.8
(-1.8) 		19.6
(-3) 		36.5
(-1.9) 		69.7
(0.4) 		109.2
(3) 		90
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 20
1 2 3 4 range
A 21.3
(3)
A 		5.7
(-3)
A 		11.2
(-0.9)
A 		9.5
(-1.5)
A 		16
B 16
(3)
A 		14
(2.2)
A 		8.2
(-0.2)
A 		1.5
(-3)
A 		15
C 14.5
(3)
A 		11.2
(1.5)
A 		5.1
(-1.4)
A 		1.6
(-3)
A 		13
avr 17.3
(3) 		10.3
(-0.2) 		8.2
(-1.2) 		4.2
(-3) 		13

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 44
1 2 3 4 5 6 range
A 5.2
(-2.1)
A 		17.9
(1.4)
A 		1.9
(-3)
A 		19.5
(1.8)
A 		18.4
(1.5)
A 		23.7
(3)
M 		22
B 10.1
(-1.8)
A 		8.7
(-2)
A 		9.4
(-1.9)
A 		1.4
(-3)
A 		30.5
(0.9)
P 		45.8
(3)
P 		44
C 12.8
(-1.2)
A 		11.3
(-1.5)
A 		2.8
(-3)
A 		5.6
(-2.5)
A 		23.7
(0.8)
A 		35.9
(3)
P 		33
avr 9.4
(-2.1) 		12.6
(-1.4) 		4.7
(-3) 		8.8
(-2.2) 		24.2
(0.8) 		35.1
(3) 		30
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 184387_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.10738
Sequence Type Exemplar sequence
Representative Public ID H32C10.1 NCBI
Target Description H32C10.1 /REP_DB=WormBase Gene ID /WP=CE21003 /TR=Q9TYQ4 /GB=AAD12799.1 /SUBMIT=ST.LOUIS /CHR=4 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_068490(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_068490 NCBI Caenorhabditis elegans H32C10.1 (H32C10.1) mRNA, complete cds. 11/11 None
SNAP00000017498 ENSEMBL cdna:SNAP chromosome:CEL140:IV:5936307:5937429:1 10/11 None
GENEFINDER00000017510 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:5936307:5937429:1 10/11 None
H32C10.1 ENSEMBL cdna:known chromosome:CEL140:IV:5934428:5937429:1 gene:H32C10.1 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrIV:5933855-5937435(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl H32C10.1
Entrez Gene 186796 Entrez gene
SwissProt Q9TYQ4 EMBL-EBI
WormBase CE34906 Wormbase
Functional Annotations
Ortholog
ID Title Organism
ATH1-121501:252540_AT hydrolase family protein / HAD-superfamily protein at
CANINE:1598983_AT similar to cat eye syndrome chromosome region, candidate 5 isoform 2 precursor cfa
CANINE_2:CFA.2832.1.S1_AT similar to cat eye syndrome chromosome region, candidate 5 isoform 2 precursor cfa
CANINE_2:CFAAFFX.24673.1.S1_AT similar to cat eye syndrome chromosome region, candidate 5 isoform 2 precursor cfa
CHICKEN:GGAAFFX.8263.1.S1_AT similar to cat eye syndrome chromosome region, candidate 5 gga
HU35KSUBA:RC_AA255544_AT cat eye syndrome chromosome region, candidate 5 hs
HU35KSUBA:AA345469_S_AT cat eye syndrome chromosome region, candidate 5 hs
HG-U133A:218592_S_AT cat eye syndrome chromosome region, candidate 5 hs
HG-U133_PLUS_2:218592_S_AT cat eye syndrome chromosome region, candidate 5 hs
HG-U133A_2:218592_S_AT cat eye syndrome chromosome region, candidate 5 hs
U133_X3P:G8923424_3P_A_AT cat eye syndrome chromosome region, candidate 5 hs
HG-U95B:51143_AT cat eye syndrome chromosome region, candidate 5 hs
HG-U95C:64313_AT cat eye syndrome chromosome region, candidate 5 hs
HU35KSUBA:AA449033_AT Cat eye syndrome chromosome region, candidate 5 hs
MOUSE430_2:1424816_AT cat eye syndrome chromosome region, candidate 5 homolog (human) mm
MOUSE430A_2:1424816_AT cat eye syndrome chromosome region, candidate 5 homolog (human) mm
MOE430A:1424816_AT cat eye syndrome chromosome region, candidate 5 homolog (human) mm
MU11KSUBA:AA204255_S_AT cat eye syndrome chromosome region, candidate 5 homolog (human) mm
MG-U74AV2:99820_F_AT cat eye syndrome chromosome region, candidate 5 homolog (human) mm
MOE430B:1440664_AT cat eye syndrome chromosome region, candidate 5 homolog (human) mm
MOUSE430_2:1440664_AT cat eye syndrome chromosome region, candidate 5 homolog (human) mm
RG-U34B:RC_AI028860_AT cat eye syndrome chromosome region, candidate 5 (predicted) rn
RG-U34C:RC_AI229405_AT cat eye syndrome chromosome region, candidate 5 (predicted) rn
Gene Ontology
GO Biological Process (view graph)
ID Description Evidence Links
6508 proteolysis inferred from electronic annotation QuickGO AmiGO
8152 metabolism inferred from electronic annotation QuickGO AmiGO
GO Cellular Component (view graph)
ID Description Evidence Links
16020 membrane inferred from electronic annotation QuickGO AmiGO
GO Molecular Function (view graph)
ID Description Evidence Links
8233 peptidase activity inferred from electronic annotation QuickGO AmiGO
16787 hydrolase activity inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast AAD12799 Hypothetical protein H32C10.1 [Caenorhabditis elegans] ref|NP_500891.2| H32C10.1 [Caenorhabditis elegans] 0.0
blast CAE64685 Hypothetical protein CBG09463 [Caenorhabditis briggsae] 0.0
blast AAD12799 Hypothetical protein H32C10.1 [Caenorhabditis elegans] ref|NP_500891.2| H32C10.1 [Caenorhabditis elegans] 1.0E-103
blast CAE64685 Hypothetical protein CBG09463 [Caenorhabditis briggsae] 2.0E-91
blast XP_394167 PREDICTED: hypothetical protein XP_394167 [Apis mellifera] 2.0E-69
Sequence
Target Sequence 
>C. ELEGANS:184387_AT
cgatcacattccgattgtcgcgtgcaacgtggatcttgtttggatggctgacgtggcatc
acaacttccacgtatcgggcatggaacattcattcatattctggattcattgtatgaaaa
gttgacaggacaacatttacagtttagggcaacacttggaaagccgactgaggtcagtta
tctccatgcagctcatcgtattcaacgtcaagccaaagccatgaagcttgaggacgttaa
atacgtctatgttattggtgataatccaatgtccgatgttcttggtgctcgacttttcga
tcgatatttgcgtcacggaggtgttggaagattcgatcatttggacttggaagctttcga
tgtgaatgatggggaaaagcccagagttcggactagaaatgttgtggagagatgtatctc
gattcttgtggagactggtgtccatcaggaccatgtgcacattaatggaatggtcaagcc
aatttctgcactgattgataatctgtcgaaaggagaacaattgaagttgcagctgcccga
ttttgtggagtac

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
CGATCACATTCCGATTGTCGCGTGC 415 249 627 Antisense
ATGGCTGACGTGGCATCACAACTTC 661 51 670 Antisense
ATCACAACTTCCACGTATCGGGCAT 416 25 684 Antisense
GACTGAGGTCAGTTATCTCCATGCA 317 375 792 Antisense
TCTCCATGCAGCTCATCGTATTCAA 587 609 807 Antisense
GTATTCAACGTCAAGCCAAAGCCAT 629 449 824 Antisense
GATAATCCAATGTCCGATGTTCTTG 227 423 886 Antisense
TTCGATCGATATTTGCGTCACGGAG 20 697 922 Antisense
TGTCCATCAGGACCATGTGCACATT 304 557 1065 Antisense
GGTCAAGCCAATTTCTGCACTGATT 513 503 1098 Antisense
GCAGCTGCCCGATTTTGTGGAGTAC 142 315 1155 Antisense
Sequence Source Affymetrix Proprietary Database