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[184347_at]

Description F22H10.6 /REP_DB=WormBase Gene ID /WP=CE09575 /TR=Q94192 /GB=AAB09103.1 /SUBMIT=ST.LOUIS /CHR=X /FEA=Sanger Annotation
Cluster 6grp_total > 90      4grp_total > 07      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 139
1 2 3 4 range
A 30.9
(-0.7)
A 		12
(-3)
A 		41.6
(0.5)
A 		62.1
(3)
A 		50
B 110.3
(3)
A 		47
(-3)
A 		59
(-1.9)
A 		50.3
(-2.7)
A 		63
C 74.7
(-0.2)
A 		10.8
(-3)
A 		27.3
(-2.3)
A 		150.1
(3)
A 		139
avr 72
(1.6) 		23.3
(-3) 		42.6
(-1.2) 		87.5
(3) 		64

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 133
1 2 3 4 5 6 range
A 76.8
(3)
A 		53.6
(0.3)
A 		43.1
(-0.9)
A 		42.5
(-1)
A 		25.5
(-3)
A 		61.2
(1.2)
A 		51
B 59.6
(3)
A 		43.2
(0.9)
A 		39.6
(0.4)
A 		42.8
(0.8)
A 		55.4
(2.5)
A 		12.9
(-3)
A 		47
C 55.1
(-1.9)
A 		75
(-0.8)
A 		52.5
(-2)
A 		146
(3)
A 		55.1
(-1.9)
A 		34.3
(-3)
A 		112
avr 63.8
(1.1) 		57.3
(0.1) 		45.1
(-1.7) 		77.1
(3) 		45.3
(-1.7) 		36.1
(-3) 		41
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 33
1 2 3 4 range
A 11.3
(3)
A 		2.6
(-3)
A 		10.9
(2.7)
A 		9.1
(1.5)
A 		9
B 35.2
(3)
A 		11.6
(-2.8)
A 		13.7
(-2.3)
A 		10.7
(-3)
A 		25
C 24.7
(2.8)
A 		3.1
(-3)
A 		9.5
(-1.3)
A 		25.3
(3)
A 		22
avr 23.7
(3) 		5.8
(-3) 		11.4
(-1.1) 		15
(0.1) 		18

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 25
1 2 3 4 5 6 range
A 14.2
(0.4)
A 		19.1
(3)
A 		9.4
(-2.1)
A 		10.8
(-1.4)
A 		7.7
(-3)
A 		14.9
(0.8)
A 		11
B 20.7
(2.4)
A 		14.4
(0.3)
A 		9.6
(-1.4)
A 		11.3
(-0.8)
A 		22.5
(3)
A 		4.8
(-3)
A 		18
C 20.4
(-0)
A 		22.9
(0.8)
A 		13.4
(-2.4)
A 		29.4
(3)
A 		17.8
(-0.9)
A 		11.5
(-3)
A 		18
avr 18.4
(2.7) 		18.8
(3) 		10.8
(-2.7) 		17.2
(1.9) 		16
(1) 		10.4
(-3) 		8
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 184347_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.17951
Sequence Type Exemplar sequence
Representative Public ID F22H10.6 NCBI
Target Description F22H10.6 /REP_DB=WormBase Gene ID /WP=CE09575 /TR=Q94192 /GB=AAB09103.1 /SUBMIT=ST.LOUIS /CHR=X /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_078296(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_078296 NCBI Caenorhabditis elegans F22H10.6 (F22H10.6) mRNA, complete cds. 11/11 None
F22H10.6 ENSEMBL cdna:known chromosome:CEL140:X:16689988:16690969:-1 gene:F22H10.6 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000018981 3/11 Cross Hyb Matching Probes None
GENEFINDER00000018986 3/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrX:16689987-16690969(-) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl F22H10.6
Entrez Gene 184876 Entrez gene
SwissProt Q94192 EMBL-EBI
WormBase CE09575 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast AAB09103 Hypothetical protein F22H10.6 [Caenorhabditis elegans] ref|NP_510697.1| F22H10.6 [Caenorhabditis elegans] 1.0E-109
Sequence
Target Sequence 
>C. ELEGANS:184347_AT
aaatcccactttcctcgaaatatatgcactatttttcttcaaatcttcattctcagaact
tcaaatcgtcttctatttgtggacatttctcttctacaattaggagataccatcatgtct
cagaacgtgaagcacaacgattccaacaacaactccgtcaaccaggttgctaccaagaat
gcctgaaacgaaaaacaggcacagcaaaagaggttccagccaaaaaagcaaaagaggaga
ttttcgccaagccctctccatcaaaaccagctccctcggcagataccatgggaattgaga
caccgatggaaccagattatatgcgccttccaaaaggtttcaatttggggaacttggctc
gtgagaaatttgcattttttttttccaaaatgtcatttattgctgataagattatttatg
atttcaatgaaaaactgttcaactcaaattctgacagcccgaattttctctatcaacgga
gcacattttttcctctgataactaaacttttcaaattaaagatattatcagaaaatgatc
acttttattattcaactctgaatacgaatgcaaattcatgcgccgcc

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
AAATCCCACTTTCCTCGAAATATAT 20 119 44 Antisense
GTGGACATTTCTCTTCTACAATTAG 204 491 122 Antisense
GATACCATCATGTCTCAGAACGTGA 422 425 149 Antisense
AACAACTCCGTCAACCAGGTTGCTA 425 133 191 Antisense
AGAGGAGATTTTCGCCAAGCCCTCT 213 69 276 Antisense
GCTCCCTCGGCAGATACCATGGGAA 407 299 313 Antisense
GAACCAGATTATATGCGCCTTCCAA 592 345 352 Antisense
GTTCAACTCAAATTCTGACAGCCCG 189 445 480 Antisense
TGACAGCCCGAATTTTCTCTATCAA 708 569 495 Antisense
GGAGCACATTTTTTCCTCTGATAAC 36 521 521 Antisense
TACGAATGCAAATTCATGCGCCGCC 239 649 606 Antisense
Sequence Source Affymetrix Proprietary Database