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[184290_at]

Description F22H10.5 /REP_DB=WormBase Gene ID /WP=CE09574 /TR=Q94191 /GB=AAB09102.1 /SUBMIT=ST.LOUIS /CHR=X /FEA=Sanger Annotation
Cluster 6grp_total > 85      4grp_total > 18      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 10
1 2 3 4 range
A 6.4
(-3)
A 		7.8
(-1.9)
A 		10.4
(0)
A 		14.3
(3)
A 		8
B 8.1
(3)
A 		7.9
(2.7)
A 		4.3
(-3)
A 		7.2
(1.6)
A 		4
C 5.8
(-2.6)
A 		8.5
(1.5)
A 		5.5
(-3)
A 		9.5
(3)
A 		4
avr 6.8
(-2.8) 		8.1
(-0.7) 		6.7
(-3) 		10.3
(3) 		4

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 20
1 2 3 4 5 6 range
A 14.7
(3)
A 		5.3
(-3)
A 		5.4
(-2.9)
A 		5.8
(-2.7)
A 		12.2
(1.4)
A 		12.8
(1.8)
A 		9
B 8.4
(3)
A 		4.4
(-0.4)
A 		3.8
(-0.9)
A 		7.3
(2.1)
A 		6.6
(1.5)
A 		1.4
(-3)
A 		7
C 6.1
(-2.5)
A 		4.6
(-3)
A 		9.6
(-1.2)
A 		21.2
(3)
A 		5.3
(-2.7)
A 		20.1
(2.6)
A 		17
avr 9.7
(1.5) 		4.8
(-3) 		6.3
(-1.6) 		11.4
(3) 		8
(-0.1) 		11.4
(3) 		7
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 2
1 2 3 4 range
A 2.3
(0.6)
A 		1.7
(-3)
A 		2.7
(3)
A 		2.1
(-0.6)
A 		1
B 2.6
(3)
A 		1.9
(0.4)
A 		1
(-3)
A 		1.5
(-1.1)
A 		2
C 1.9
(-1)
A 		2.5
(3)
A 		1.9
(-1)
A 		1.6
(-3)
A 		1
avr 2.3
(3) 		2
(0) 		1.9
(-1) 		1.7
(-3) 		1

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 6
1 2 3 4 5 6 range
A 2.7
(0.6)
A 		1.9
(-1.3)
A 		1.2
(-3)
A 		1.5
(-2.3)
A 		3.7
(3)
A 		3.1
(1.6)
A 		3
B 2.9
(3)
A 		1.5
(-0.5)
A 		0.9
(-2)
A 		1.9
(0.5)
A 		2.7
(2.5)
A 		0.5
(-3)
A 		2
C 2.3
(-2)
A 		1.4
(-3)
A 		2.5
(-1.8)
A 		4.3
(0.3)
A 		1.7
(-2.7)
A 		6.7
(3)
A 		5
avr 2.6
(0.5) 		1.6
(-2.7) 		1.5
(-3) 		2.6
(0.5) 		2.7
(0.8) 		3.4
(3) 		2
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 184290_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.17805
Sequence Type Exemplar sequence
Representative Public ID F22H10.5 NCBI
Target Description F22H10.5 /REP_DB=WormBase Gene ID /WP=CE09574 /TR=Q94191 /GB=AAB09102.1 /SUBMIT=ST.LOUIS /CHR=X /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_078295(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_078295 NCBI Caenorhabditis elegans F22H10.5 (F22H10.5) mRNA, complete cds. 11/11 None
SNAP00000018980 ENSEMBL cdna:SNAP chromosome:CEL140:X:16684327:16686954:-1 11/11 None
GENEFINDER00000018988 ENSEMBL cdna:GeneFinder chromosome:CEL140:X:16684327:16688138:-1 11/11 None
F22H10.5 ENSEMBL cdna:known chromosome:CEL140:X:16686228:16688324:-1 gene:F22H10.5 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrX:16686227-16688324(-) 96.87 100.0
Public Domain and Genome References
Gene Title
Ensembl F22H10.5
Entrez Gene 184875 Entrez gene
SwissProt Q94191 EMBL-EBI
WormBase CE09574 Wormbase
Functional Annotations
Gene Ontology
GO Biological Process (view graph)
ID Description Evidence Links
6468 protein amino acid phosphorylation inferred from electronic annotation QuickGO AmiGO
GO Molecular Function (view graph)
ID Description Evidence Links
4672 protein kinase activity inferred from electronic annotation QuickGO AmiGO
5524 ATP binding inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast AAB09102 Hypothetical protein F22H10.5 [Caenorhabditis elegans] ref|NP_510696.1| F22H10.5 [Caenorhabditis elegans] 1.0E-175
blast AAB09102 Hypothetical protein F22H10.5 [Caenorhabditis elegans] ref|NP_510696.1| F22H10.5 [Caenorhabditis elegans] 1.0E-168
blast AAB09101 Hypothetical protein F22H10.4 [Caenorhabditis elegans] ref|NP_510695.1| F22H10.4 [Caenorhabditis elegans] 1.0E-123
blast AAB09102 Hypothetical protein F22H10.5 [Caenorhabditis elegans] ref|NP_510696.1| F22H10.5 [Caenorhabditis elegans] 1.0E-122
blast AAN73854 Hypothetical protein Y40A1A.1 [Caenorhabditis elegans] ref|NP_001024960.1| Y40A1A.1 [Caenorhabditis elegans] 1.0E-89
blast AAN73854 Hypothetical protein Y40A1A.1 [Caenorhabditis elegans] ref|NP_001024960.1| Y40A1A.1 [Caenorhabditis elegans] 3.0E-86
blast AAN73854 Hypothetical protein Y40A1A.1 [Caenorhabditis elegans] ref|NP_001024960.1| Y40A1A.1 [Caenorhabditis elegans] 3.0E-64
Sequence
Target Sequence 
>C. ELEGANS:184290_AT
gaaatctctgtcagctctgagtactaaaaaccacgccaacgtcactgaaaacttcgtaaa
aatggttatggcaaaagttgtaataggaaagcacccaacttctctactaaaggcttggga
cacgtatcgagtggaagaggagtctgaaaacatccgtccgtcaaagttcaataaaaatca
actatacctggttttgatactttcaaagggcggaactgccctcgagaagttcaaaatgga
gagtatcgatcaattccattctattatgcagcaactcgtctattcgttggcaattgcgga
aacggagttgcagtttgagcatcgggaccttcacctcggaaatgtgcttattgacaaaac
cggggcggaggagttagagttcgtcctcaacaaccgtccggtgagaataaaattgcgagg
agttcgtgttacgattatagactttacatggagccgcattcaagaaggcggcaaaacaat
ttacgtcgacacggaaattgacacagcaatgtttgaaggattcagtgactcgcaattcg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GAAATCTCTGTCAGCTCTGAGTACT 229 363 462 Antisense
AACCACGCCAACGTCACTGAAAACT 571 145 490 Antisense
ATAGGAAAGCACCCAACTTCTCTAC 299 21 544 Antisense
AGGAGTCTGAAAACATCCGTCCGTC 373 55 599 Antisense
GCGGAACTGCCCTCGAGAAGTTCAA 234 287 671 Antisense
GAGTATCGATCAATTCCATTCTATT 553 399 702 Antisense
GCAGCAACTCGTCTATTCGTTGGCA 384 313 729 Antisense
GGACCTTCACCTCGGAAATGTGCTT 306 523 786 Antisense
GAGTTAGAGTTCGTCCTCAACAACC 130 399 832 Antisense
GACTTTACATGGAGCCGCATTCAAG 73 373 901 Antisense
GAAGGATTCAGTGACTCGCAATTCG 230 335 976 Antisense
Sequence Source Affymetrix Proprietary Database