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[184244_at]

Description Y32B12B.2 /REP_DB=WormBase Gene ID /WP=CE19063 /TR=Q9XX35 /GB=CAA21005.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_high1_10_10 > 79      6grp_total > 88      4grp_total > 06      6grp_high1_sub > Cu      6grp_total_sub > Increase      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 77
1 2 3 4 range
A 80.8
(2)
P 		39.7
(-3)
A 		55.4
(-1.1)
P 		88.7
(3)
A 		49
B 50.3
(-3)
P 		65.5
(3)
M 		57.3
(-0.2)
P 		64
(2.4)
A 		15
C 79.5
(-1)
P 		61
(-3)
A 		75.9
(-1.4)
P 		116.9
(3)
A 		56
avr 70.2
(-0.4) 		55.4
(-3) 		62.9
(-1.7) 		89.9
(3) 		35

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 137
1 2 3 4 5 6 range
A 59.7
(-1)
A 		40.3
(-3)
P 		75.1
(0.6)
P 		52.2
(-1.8)
P 		93.8
(2.5)
P 		98.9
(3)
P 		59
B 45.2
(-2.7)
P 		92.6
(-0.6)
P 		78.6
(-1.2)
P 		37.5
(-3)
P 		92.7
(-0.6)
P 		174.5
(3)
P 		137
C 71.7
(-2.4)
P 		103.5
(0.1)
P 		75.7
(-2.1)
P 		64
(-3)
A 		98.5
(-0.3)
P 		141.6
(3)
P 		78
avr 58.9
(-2.5) 		78.8
(-1.1) 		76.5
(-1.3) 		51.2
(-3) 		95
(0) 		138.3
(3) 		87
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 21
1 2 3 4 range
A 29.4
(3)
P 		8.6
(-3)
A 		14.5
(-1.3)
P 		13
(-1.7)
A 		21
B 16
(2.6)
P 		16.2
(3)
M 		13.3
(-3)
P 		13.6
(-2.4)
A 		3
C 26.3
(2.9)
P 		17.5
(-3)
A 		26.4
(3)
P 		19.7
(-1.5)
A 		9
avr 23.9
(3) 		14.1
(-3) 		18.1
(-0.6) 		15.4
(-2.2) 		10

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 55
1 2 3 4 5 6 range
A 11
(-3)
A 		14.3
(-1.9)
P 		16.4
(-1.1)
P 		13.2
(-2.2)
P 		28.3
(3)
P 		24.1
(1.5)
P 		17
B 15.7
(-2.4)
P 		30.8
(-0.7)
P 		19.1
(-2)
P 		9.9
(-3)
P 		37.7
(0)
P 		65.1
(3)
P 		55
C 26.6
(-0.6)
P 		31.6
(0.3)
P 		19.3
(-1.9)
P 		12.9
(-3)
A 		31.9
(0.3)
P 		47.4
(3)
P 		35
avr 17.8
(-2) 		25.6
(-0.6) 		18.3
(-1.9) 		12
(-3) 		32.6
(0.7) 		45.5
(3) 		34
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 184244_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.14522
Sequence Type Exemplar sequence
Representative Public ID Y32B12B.2 NCBI
Target Description Y32B12B.2 /REP_DB=WormBase Gene ID /WP=CE19063 /TR=Q9XX35 /GB=CAA21005.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_074787(10)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_074787 NCBI Caenorhabditis elegans Y32B12B.2 (Y32B12B.2) mRNA, complete cds. 10/11 None
GENEFINDER00000012879 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:16543962:16552312:1 11/11 None
Y32B12B.2 ENSEMBL cdna:known chromosome:CEL140:V:16540978:16552420:1 gene:Y32B12B.2 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000012871 6/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:16540987-16552312(+) 93.72 100.0
Public Domain and Genome References
Gene Title
Ensembl Y32B12B.2
Entrez Gene 180109 Entrez gene
SwissProt Q9XX35 EMBL-EBI
WormBase CE32518 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast CAA21005 Hypothetical protein Y32B12B.2 [Caenorhabditis elegans] ref|NP_507188.2| Y32B12B.2 [Caenorhabditis elegans] 0.0
blast CAE56311 Hypothetical protein CBG23974 [Caenorhabditis briggsae] 0.0
blast CAA21005 Hypothetical protein Y32B12B.2 [Caenorhabditis elegans] ref|NP_507188.2| Y32B12B.2 [Caenorhabditis elegans] 1.0E-129
blast CAE56311 Hypothetical protein CBG23974 [Caenorhabditis briggsae] 6.0E-85
Sequence
Target Sequence 
>C. ELEGANS:184244_AT
gatgagcccagagatttgacggagctcgaggaagaactgggaatttccattttggaagag
acgctggatggaatgaatgacgatgactggattgtggacgatgataatgacgaagatgga
gaatgtattgatgaggaagaagactatgataatacagaaattgtatatgaatcagaagaa
gatgaacttgatggtctcgaagcgaaattggaacgagaaagcgatcgaagacataagaaa
tgggagaaaaagaataaagtgatgattgatagtgatgatgaggaagaagaagaagaaaat
gatgatgataaagagaatcaggatgatgatactcatgatatcgtggattgggataagttg
gatgaatctgatgaggatgaggatgagctgaaagatcggaagcatggactttttgatgat
gaagcttctgaaagtgatggtgaagatgaatttgaagatgaggatgaggaagagcctgaa
ggagaggatttggaggattctgatgatgagagactttttgagcatggtccctccaaaaaa
cgccgatttgagcagcagaagcaaaatgcgaaacgacgttgcatcgtgat

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GATGAGCCCAGAGATTTGACGGAGC 402 411 1747 Antisense
GAGCTCGAGGAAGAACTGGGAATTT 45 385 1768 Antisense
ACGCTGGATGGAATGAATGACGATG 537 89 1807 Antisense
ATGACTGGATTGTGGACGATGATAA 375 45 1829 Antisense
AAGATGAACTTGATGGTCTCGAAGC 546 155 1925 Antisense
ATACTCATGATATCGTGGATTGGGA 369 21 2075 Antisense
GATCGGAAGCATGGACTTTTTGATG 676 417 2140 Antisense
GAGACTTTTTGAGCATGGTCCCTCC 588 389 2256 Antisense
TGAGCATGGTCCCTCCAAAAAACGC 625 567 2265 Antisense
AACGCCGATTTGAGCAGCAGAAGCA 627 145 2285 Antisense
ATGCGAAACGACGTTGCATCGTGAT 371 39 2312 Antisense
Sequence Source Affymetrix Proprietary Database