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[184207_at]

Description Y17G7B.11 /REP_DB=WormBase Gene ID /WP=CE19045 /TR=Q9XXI4 /GB=CAA19457.1 /SUBMIT=HINXTON /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_high1_10_10 > 01      6grp_total > 04      4grp_total > 62      6grp_high1_sub > De      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 226
1 2 3 4 range
A 263.7
(3)
P 		162.8
(-0.2)
P 		133.2
(-1.1)
P 		72.5
(-3)
A 		191
B 259.6
(3)
P 		136.1
(-0.5)
P 		145.7
(-0.2)
P 		47.8
(-3)
A 		212
C 196.8
(3)
P 		87
(-1.1)
M 		169.2
(2)
P 		37.9
(-3)
A 		159
avr 240
(3) 		128.6
(-0.6) 		149.4
(0.1) 		52.7
(-3) 		187

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 165
1 2 3 4 5 6 range
A 190.2
(3)
P 		106.9
(-1.5)
P 		129.7
(-0.2)
P 		115.6
(-1)
P 		124.9
(-0.5)
P 		78
(-3)
A 		112
B 210.2
(3)
P 		156.2
(1)
P 		164.2
(1.3)
P 		161.4
(1.2)
P 		114.9
(-0.5)
P 		44.9
(-3)
A 		165
C 175.3
(3)
P 		174.8
(3)
P 		103.4
(-1.1)
P 		137.7
(0.8)
A 		70.6
(-3)
P 		76.4
(-2.7)
P 		105
avr 191.9
(3) 		146
(0.8) 		132.4
(0.2) 		138.2
(0.4) 		103.5
(-1.2) 		66.4
(-3) 		126
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 90
1 2 3 4 range
A 96
(3)
P 		35.3
(-1.3)
P 		34.8
(-1.3)
P 		10.6
(-3)
A 		85
B 82.8
(3)
P 		33.6
(-1.1)
P 		33.8
(-1)
P 		10.2
(-3)
A 		73
C 65.1
(3)
P 		25
(-1.1)
M 		59
(2.4)
P 		6.4
(-3)
A 		59
avr 81.3
(3) 		31.3
(-1.2) 		42.5
(-0.2) 		9.1
(-3) 		72

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 56
1 2 3 4 5 6 range
A 35.1
(2.1)
P 		38
(3)
P 		28.2
(-0.1)
P 		29.3
(0.3)
P 		37.7
(2.9)
P 		19
(-3)
A 		19
B 73.1
(3)
P 		52
(0.8)
P 		39.9
(-0.5)
P 		42.8
(-0.2)
P 		46.7
(0.2)
P 		16.7
(-3)
A 		56
C 65
(3)
P 		53.3
(1.3)
P 		26.3
(-2.5)
P 		27.7
(-2.3)
A 		22.9
(-3)
P 		25.6
(-2.6)
P 		42
avr 57.7
(3) 		47.8
(1.4) 		31.5
(-1.2) 		33.3
(-0.9) 		35.8
(-0.5) 		20.4
(-3) 		37
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 184207_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.3709
Sequence Type Exemplar sequence
Representative Public ID Y17G7B.11 NCBI
Target Description Y17G7B.11 /REP_DB=WormBase Gene ID /WP=CE19045 /TR=Q9XXI4 /GB=CAA19457.1 /SUBMIT=HINXTON /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_064166(10)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_064166 NCBI Caenorhabditis elegans Y17G7B.11 (Y17G7B.11) mRNA, complete cds. 10/11 None
SNAP00000030325 ENSEMBL cdna:SNAP chromosome:CEL140:II:12057088:12067572:-1 10/11 None
GENEFINDER00000030396 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:12060228:12062522:-1 10/11 None
Y17G7B.11 ENSEMBL cdna:known chromosome:CEL140:II:12060228:12062522:-1 gene:Y17G7B.11 10/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:12060224-12062519(-) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl Y17G7B.11
Entrez Gene 174847 Entrez gene
SwissProt Q9XXI4 EMBL-EBI
WormBase CE32514 Wormbase
Functional Annotations
Ortholog
ID Title Organism
CANINE_2:CFAAFFX.23219.1.S1_S_AT similar to arrestin domain containing 2 isoform 2 cfa
HU35KSUBB:RC_H08863_AT arrestin domain containing 2 hs
U133_X3P:HS.30882.0.S1_3P_AT arrestin domain containing 2 hs
HG-U133_PLUS_2:226055_AT arrestin domain containing 2 hs
HG-U133B:226055_AT arrestin domain containing 2 hs
HG-U95B:44660_AT arrestin domain containing 2 hs
HG-U95B:52275_S_AT arrestin domain containing 2 hs
MG-U74CV2:165605_AT arrestin domain containing 2 mm
MG-U74CV2:169167_AT arrestin domain containing 2 mm
MOE430B:1428352_AT arrestin domain containing 2 mm
MOUSE430_2:1428352_AT arrestin domain containing 2 mm
MU19KSUBB:TC30516_AT Arrestin domain containing 2, mRNA (cDNA clone MGC:41244 IMAGE:1067080) mm
MU19KSUBC:TC41854_AT Arrestin domain containing 2, mRNA (cDNA clone MGC:41244 IMAGE:1067080) mm
RAE230B:1383608_AT arrestin domain containing 2 (predicted) rn
RAT230_2:1383608_AT arrestin domain containing 2 (predicted) rn
RG-U34B:RC_AA849365_AT Arrestin domain containing 2 (predicted) rn
Protein Similarities
Method ID Description E-Value
blast CAA19457 Hypothetical protein Y17G7B.11 [Caenorhabditis elegans] ref|NP_496567.2| Y17G7B.11 [Caenorhabditis elegans] 0.0
blast CAE57953 Hypothetical protein CBG01012 [Caenorhabditis briggsae] 1.0E-156
blast CAE57953 Hypothetical protein CBG01012 [Caenorhabditis briggsae] 1.0E-155
blast CAA93495 Hypothetical protein F48F7.7 [Caenorhabditis elegans] ref|NP_510328.2| F48F7.7 [Caenorhabditis elegans] 4.0E-91
Protein Domains
Database ID Description E-Value
Pfam IPR000698 EMBL-EBI Arrestin 1.2E-47
Pfam IPR000698 EMBL-EBI Arrestin 3.5E-60
Pfam IPR000698 EMBL-EBI Arrestin 1.2E-47
Pfam IPR000698 EMBL-EBI Arrestin 3.5E-60
Sequence
Target Sequence 
>C. ELEGANS:184207_AT
gtcacggcaacatgatcggcgtcacagcccatactcataatcgtaacgacgaaaagttgg
ttgccgaatcgagaagagtagctgatgttccagcgaaatcccgtgggcaaatggttcttt
cgatgaagattccagcgattgttccgtcttttaattgtccgattatcgccgtggattatt
gtctaaccgttaaagtttcaactcaacagattttcggaggtggcttgaaatgtgaattcc
cattgatcattggaacaatcccaattcgacagatgaatcaagcagctcctggagcaatgc
caactatgccatcggtctccgctcctccatatcctgtagtcgccggagcatctgcgtctc
aagcagtctacccgactgctccatcggccccgccagcgtctcccggaggagaagctcctc
caagctatgaagagtctgtacacggagctgggaaagttgaggatgcagaggtaagcttca
agcttgaaattctcagcaaaatgctcacggaaaacttgcaggccttcgctcctcgctacc
cagtctacaacaacttgccacaacagcaaaattctcaacttccacc

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GTCACGGCAACATGATCGGCGTCAC 397 463 698 Antisense
GTCACAGCCCATACTCATAATCGTA 300 465 718 Antisense
TGATGTTCCAGCGAAATCCCGTGGG 67 565 780 Antisense
AAGATTCCAGCGATTGTTCCGTCTT 263 155 823 Antisense
TGTTCCGTCTTTTAATTGTCCGATT 104 563 837 Antisense
ATCGCCGTGGATTATTGTCTAACCG 2 39 862 Antisense
GATGAATCAAGCAGCTCCTGGAGCA 629 411 969 Antisense
TGGAGCAATGCCAACTATGCCATCG 436 547 987 Antisense
TCACGGAAAACTTGCAGGCCTTCGC 63 623 1202 Antisense
CTACCCAGTCTACAACAACTTGCCA 102 225 1233 Antisense
AACAGCAAAATTCTCAACTTCCACC 304 135 1259 Antisense
Sequence Source Affymetrix Proprietary Database