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[184012_at]

Description T05E12.7 /REP_DB=WormBase Gene ID /WP=CE16350 /TR=O45755 /GB=CAB04991.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_high1_10_10 > 71      4grp_high_8_8 > 63      6grp_total > 71      4grp_total > 56      6grp_cgc > 84      6grp_high1_sub > 04      6grp_cgc_sub > 04      6grp_total_sub > Hat      6grp_rule_based > S4      4grp_rule_based > L3      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 93
1 2 3 4 range
A 63.2
(-2.7)
P 		76.6
(-1.7)
P 		139.4
(3)
P 		59.8
(-3)
P 		80
B 72.3
(-2.2)
P 		89.7
(-1.1)
P 		153
(3)
P 		59.6
(-3)
P 		93
C 76.7
(-0.5)
P 		92.8
(1.9)
P 		100
(3)
P 		60.5
(-3)
A 		40
avr 70.7
(-2.1) 		86.4
(-0.8) 		130.8
(3) 		60
(-3) 		71

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 131
1 2 3 4 5 6 range
A 61.6
(-3)
P 		116.4
(2.5)
P 		86.7
(-0.5)
P 		121.6
(3)
P 		99.2
(0.8)
P 		68.5
(-2.3)
A 		60
B 75.3
(-1.1)
P 		84
(-0.5)
P 		133.6
(3)
P 		128.1
(2.6)
P 		112
(1.5)
P 		48.7
(-3)
P 		85
C 80.5
(-2.5)
P 		83.5
(-2.4)
P 		122.4
(-0.2)
P 		179.9
(3)
P 		72.3
(-3)
P 		76
(-2.8)
P 		108
avr 72.5
(-2.4) 		94.6
(-0.7) 		114.2
(0.8) 		143.2
(3) 		94.5
(-0.7) 		64.4
(-3) 		79
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 28
1 2 3 4 range
A 23
(0.1)
P 		16.6
(-1.3)
P 		36.4
(3)
P 		8.8
(-3)
P 		28
B 23.1
(-0.3)
P 		22.2
(-0.5)
P 		35.5
(3)
P 		12.7
(-3)
P 		23
C 25.4
(0.7)
P 		26.7
(1)
P 		34.8
(3)
P 		10.2
(-3)
A 		25
avr 23.8
(0.2) 		21.8
(-0.3) 		35.6
(3) 		10.6
(-3) 		25

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 34
1 2 3 4 5 6 range
A 11.4
(-3)
P 		41.4
(3)
P 		18.9
(-1.5)
P 		30.9
(0.9)
P 		29.9
(0.7)
P 		16.7
(-1.9)
A 		30
B 26.2
(-1.2)
P 		28
(-0.8)
P 		32.4
(0.1)
P 		33.9
(0.5)
P 		45.5
(3)
P 		18.2
(-3)
P 		27
C 29.8
(0)
P 		25.5
(-2)
P 		31.1
(0.6)
P 		36.2
(3)
P 		23.4
(-3)
P 		25.4
(-2.1)
P 		13
avr 22.5
(-1.9) 		31.6
(2.1) 		27.5
(0.3) 		33.7
(3) 		32.9
(2.6) 		20.1
(-3) 		14
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 184012_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.13144
Sequence Type Exemplar sequence
Representative Public ID T05E12.7 NCBI
Target Description T05E12.7 /REP_DB=WormBase Gene ID /WP=CE16350 /TR=O45755 /GB=CAB04991.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
T05E12.7 ENSEMBL cdna:pseudogene chromosome:CEL140:V:17092968:17094188:1 gene:T05E12.7 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:17092967-17094192(+) 100.0 100.0
Public Domain and Genome References
Ensembl T05E12.7
Sequence
Target Sequence 
>C. ELEGANS:184012_AT
gtaacctgtgtttccactgcaatattcgtgacatttgaaaatagatttttcaccttattc
gcccaaacatccaattggaaatattttcgaaaatacgcaattggcttcagttacataatc
ataccattatactatctacctatccagttcttacttcctgatcaaataactggaagagaa
ctctcatgggcgatgcttgactgcataccggaactaccgagcgatgggaggctgctgttc
gtatttcaagttgagaaacttgctccggctctcacaatgatggtatctgaaagtgttcca
acaattcaagtggggtcctttttctttttgaacgtttataatttgatatttgccagtcct
agtgggatatccagaaagacagtgcaaatgcagcataggctggtgatagccttgataatt
cagacctctgtatcactattcttcttcctcgtcccaatcaacctcattatatca

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GTAACCTGTGTTTCCACTGCAATAT 234 463 316 Antisense
CCTTATTCGCCCAAACATCCAATTG 57 267 368 Antisense
ATACCATTATACTATCTACCTATCC 454 23 436 Antisense
TACCTATCCAGTTCTTACTTCCTGA 65 651 452 Antisense
AGAACTCTCATGGGCGATGCTTGAC 67 73 492 Antisense
CTTGACTGCATACCGGAACTACCGA 15 219 511 Antisense
ACTACCGAGCGATGGGAGGCTGCTG 634 101 528 Antisense
GAGGCTGCTGTTCGTATTTCAAGTT 661 405 543 Antisense
CTCCGGCTCTCACAATGATGGTATC 565 233 578 Antisense
AGACCTCTGTATCACTATTCTTCTT 95 71 737 Antisense
CGTCCCAATCAACCTCATTATATCA 702 245 765 Antisense
Sequence Source Affymetrix Proprietary Database