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[183744_at]

Description F59A1.10 /REP_DB=WormBase Gene ID /WP=CE18794 /TR=Q9XUW0 /GB=CAB04533.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_highest_10_10 > 66      6grp_high1_10_10 > 66      4grp_highest_8_8 > 13      4grp_high_8_8 > 30      6grp_highest_nonorm > 88      6grp_total > 66      4grp_total > 24      6grp_highest_sub > Da      6grp_high1_sub > Da      4grp_rule_based > L4      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 1997
1 2 3 4 range
A 304.6
(-3)
P 		1062.9
(-0.7)
P 		1491.5
(0.6)
P 		2301.2
(3)
P 		1997
B 320.3
(-3)
P 		1029
(-0.8)
P 		1581.2
(0.8)
P 		2286.3
(3)
P 		1966
C 312
(-3)
P 		1141
(-0)
P 		1435
(1.1)
P 		1975.5
(3)
P 		1664
avr 312.3
(-3) 		1077.6
(-0.6) 		1502.6
(0.8) 		2187.7
(3) 		1875

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 1786
1 2 3 4 5 6 range
A 1215.1
(-1)
P 		724.3
(-3)
P 		1372
(-0.4)
P 		1134.6
(-1.3)
P 		924.7
(-2.2)
P 		2203.4
(3)
P 		1479
B 1263.8
(-1.8)
P 		943
(-3)
P 		1309.9
(-1.6)
P 		1464.8
(-1)
P 		1106.6
(-2.4)
P 		2483.9
(3)
P 		1541
C 1010.2
(-2.1)
P 		856.3
(-2.6)
P 		1267.2
(-1.2)
P 		1449.5
(-0.6)
P 		749.2
(-3)
P 		2510.3
(3)
P 		1761
avr 1163
(-1.8) 		841.2
(-3) 		1316.4
(-1.2) 		1349.6
(-1) 		926.8
(-2.7) 		2399.2
(3) 		1558
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 398
1 2 3 4 range
A 110.9
(-3)
P 		230.7
(-0.4)
P 		389.9
(3)
P 		336.8
(1.9)
P 		279
B 102.1
(-3)
P 		254.1
(-0.6)
P 		366.4
(1.1)
P 		487.2
(3)
P 		385
C 103.3
(-3)
P 		328.1
(0.4)
P 		500.1
(3)
P 		333.1
(0.5)
P 		397
avr 105.4
(-3) 		271
(0.2) 		418.8
(3) 		385.7
(2.4) 		313

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 702
1 2 3 4 5 6 range
A 224
(-3)
P 		257.6
(-2.4)
P 		298.8
(-1.6)
P 		287.8
(-1.8)
P 		279
(-1.9)
P 		536.5
(3)
P 		313
B 439.8
(-1.8)
P 		313.9
(-3)
P 		318.1
(-3)
P 		388
(-2.3)
P 		449.6
(-1.7)
P 		926.2
(3)
P 		612
C 374.5
(-1.7)
P 		261.3
(-2.8)
P 		322.5
(-2.2)
P 		291.5
(-2.5)
P 		242.4
(-3)
P 		840.4
(3)
P 		598
avr 346.1
(-2.2) 		277.6
(-3) 		313.1
(-2.6) 		322.4
(-2.5) 		323.7
(-2.4) 		767.7
(3) 		490
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 183744_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.14354
Sequence Type Exemplar sequence
Representative Public ID F59A1.10 NCBI
Target Description F59A1.10 /REP_DB=WormBase Gene ID /WP=CE18794 /TR=Q9XUW0 /GB=CAB04533.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_075068(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_075068 NCBI Caenorhabditis elegans F59A1.10 (F59A1.10) mRNA, complete cds. 11/11 None
SNAP00000002317 ENSEMBL cdna:SNAP chromosome:CEL140:V:17662880:17664253:1 11/11 None
GENEFINDER00000002334 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:17662880:17664253:1 11/11 None
F59A1.10 ENSEMBL cdna:known chromosome:CEL140:V:17662880:17664321:1 gene:F59A1.10 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:17662879-17664253(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl F59A1.10
Entrez Gene 180160 Entrez gene
SwissProt Q9XUW0 EMBL-EBI
WormBase CE18794 Wormbase
Functional Annotations
Ortholog
ID Title Organism
CANINE:1605403_AT similar to monoacylglycerol O-acyltransferase 1 cfa
CANINE_2:CFA.2757.1.S1_AT similar to monoacylglycerol O-acyltransferase 1 cfa
CANINE_2:CFAAFFX.24768.1.S1_S_AT similar to monoacylglycerol O-acyltransferase 1 cfa
CHICKEN:GGAAFFX.3264.1.S1_AT similar to Dgat2l1-prov protein gga
U133_X3P:HS2.344090.1.S1_3P_AT monoacylglycerol O-acyltransferase 1 hs
HG-U133_PLUS_2:1553062_AT monoacylglycerol O-acyltransferase 1 hs
MG-U74BV2:164144_AT monoacylglycerol O-acyltransferase 1 mm
MOE430A:1419504_AT monoacylglycerol O-acyltransferase 1 mm
MOUSE430A_2:1419504_AT monoacylglycerol O-acyltransferase 1 mm
MOUSE430_2:1419504_AT monoacylglycerol O-acyltransferase 1 mm
RAE230B:1385308_AT monoacylglycerol O-acyltransferase 1 (predicted) rn
RAT230_2:1385308_AT monoacylglycerol O-acyltransferase 1 (predicted) rn
YEAST_2:1776244_AT Diacylglycerol acyltransferase, catalyzes the terminal step of triacylglycerol (TAG) formation, acylates diacylglycerol using acyl-CoA as an acyl donor, localized to lipid particles Sc
Protein Similarities
Method ID Description E-Value
blast CAB04533 Hypothetical protein F59A1.10 [Caenorhabditis elegans] ref|NP_507469.1| F59A1.10 [Caenorhabditis elegans] 0.0
blast CAE61732 Hypothetical protein CBG05683 [Caenorhabditis briggsae] 1.0E-165
blast CAE74669 Hypothetical protein CBG22470 [Caenorhabditis briggsae] 1.0E-104
Protein Domains
Database ID Description E-Value
Pfam IPR007130 EMBL-EBI Diacylglycerol acyltransferase 1.0E-126
Trans Membrane
ID Number Of Domains Domain Boundaries
NP_507469.1 1 31-53
F59A1.10 1 31-53
SNAP00000002317 1 31-53
GENEFINDER00000002334 1 31-53
Sequence
Target Sequence 
>C. ELEGANS:183744_AT
caaaggcatccgcttcaacatctgcaccttgcccggcaacttcaccgcaatgttccgccg
cgagatcctcctcagcatcggtatgatcgagagctccaaagaatccatcgagcacgtgct
caactccgaggaaaagggccgtgccgttgtaattgtcgtgggtggagccgctgaagctct
tgaagctcacccagggaagcatactctaacactggcaaatcgcaaaggtttcgtgagaga
agccgtgaagaccggagctcatctggtgccagtttatgcgtttggagagaatgacatata
taagcaaattgacaacccggaaggctcgaaattacggaaaattcaagaatggggaaagaa
gaaaatgggaatttcactgccactaatctacggaagaggatattttcaaatggctcttgg
gcttcttccaatgagccgagctgtgaatgtagttgtcggagcgcctattcaa

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
CAAAGGCATCCGCTTCAACATCTGC 627 189 441 Antisense
GATCCTCCTCAGCATCGGTATGATC 214 415 504 Antisense
CATCGAGCACGTGCTCAACTCCGAG 52 213 546 Antisense
GCCGTGCCGTTGTAATTGTCGTGGG 273 283 578 Antisense
GCTCTTGAAGCTCACCCAGGGAAGC 512 297 616 Antisense
GGGAAGCATACTCTAACACTGGCAA 266 493 634 Antisense
TGAAGACCGGAGCTCATCTGGTGCC 570 573 686 Antisense
TGGGAATTTCACTGCCACTAATCTA 28 553 806 Antisense
TCAAATGGCTCTTGGGCTTCTTCCA 378 627 846 Antisense
GGGCTTCTTCCAATGAGCCGAGCTG 380 491 859 Antisense
TGTAGTTGTCGGAGCGCCTATTCAA 23 561 888 Antisense
Sequence Source Affymetrix Proprietary Database