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[183647_at]

Description F13H10.5 /REP_DB=WormBase Gene ID /WP=CE15820 /TR=O45359 /GB=CAA15977.1 /SUBMIT=HINXTON /CHR=4 /FEA=Sanger Annotation
Cluster 6grp_high1_10_10 > 03      6grp_total > 25      4grp_total > 52      6grp_high1_sub > De      6grp_total_sub > Decrease      6grp_rule_based > S1      4grp_rule_based > L2      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 146
1 2 3 4 range
A 126.3
(2.9)
P 		128.1
(3)
P 		121
(2.6)
P 		31.3
(-3)
A 		97
B 112.3
(-0.2)
P 		177.5
(3)
P 		98
(-0.9)
P 		54.1
(-3)
A 		123
C 163.7
(3)
P 		147.6
(2)
P 		135.6
(1.2)
P 		68.1
(-3)
A 		96
avr 134.1
(2) 		151.1
(3) 		118.2
(1) 		51.2
(-3) 		100

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 141
1 2 3 4 5 6 range
A 147
(2.4)
P 		158.7
(3)
P 		128
(1.5)
P 		65.8
(-1.6)
P 		76.5
(-1.1)
A 		38.8
(-3)
P 		120
B 155.4
(3)
P 		140.6
(2.2)
P 		126
(1.3)
P 		102.8
(0)
P 		49.9
(-3)
P 		80.1
(-1.3)
P 		106
C 180.2
(3)
P 		180.1
(3)
P 		97.8
(-1.1)
P 		58.5
(-3)
P 		77.3
(-2.1)
P 		93.1
(-1.3)
P 		122
avr 160.9
(3) 		159.8
(2.9) 		117.3
(0.2) 		75.7
(-2.5) 		67.9
(-3) 		70.7
(-2.8) 		93
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 50
1 2 3 4 range
A 46
(3)
P 		27.8
(0.4)
P 		31.6
(0.9)
P 		4.6
(-3)
A 		41
B 35.8
(1.5)
P 		43.8
(3)
P 		22.7
(-0.9)
P 		11.5
(-3)
A 		32
C 54.2
(3)
P 		42.4
(1.3)
P 		47.3
(2)
P 		11.5
(-3)
A 		43
avr 45.3
(3) 		38
(1.8) 		33.9
(1.1) 		9.2
(-3) 		36

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 57
1 2 3 4 5 6 range
A 27.1
(-0.7)
P 		56.4
(3)
P 		27.9
(-0.6)
P 		16.7
(-2.1)
P 		23.1
(-1.3)
A 		9.4
(-3)
P 		47
B 54.1
(3)
P 		46.8
(1.7)
P 		30.6
(-1.2)
P 		27.2
(-1.8)
P 		20.3
(-3)
P 		29.9
(-1.3)
P 		34
C 66.8
(3)
P 		54.9
(1.7)
P 		24.9
(-1.6)
P 		11.8
(-3)
P 		25
(-1.6)
P 		31.2
(-0.9)
P 		55
avr 49.3
(2.4) 		52.7
(3) 		27.8
(-1.4) 		18.6
(-3) 		22.8
(-2.3) 		23.5
(-2.1) 		34
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 183647_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.9257
Sequence Type Exemplar sequence
Representative Public ID F13H10.5 NCBI
Target Description F13H10.5 /REP_DB=WormBase Gene ID /WP=CE15820 /TR=O45359 /GB=CAA15977.1 /SUBMIT=HINXTON /CHR=4 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_069648(9)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_069648 NCBI Caenorhabditis elegans F13H10.5 (F13H10.5) mRNA, complete cds. 9/11 None
GENEFINDER00000039800 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:10991009:10993101:1 9/11 None
F13H10.5 ENSEMBL cdna:known chromosome:CEL140:IV:10991009:10994107:1 gene:F13H10.5 9/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000039788 5/11 Cross Hyb Matching Probes None
SNAP00000039789 4/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrIV:10991014-10993027(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl F13H10.5
Entrez Gene 184442 Entrez gene
SwissProt O45359 EMBL-EBI
WormBase CE35475 Wormbase
Functional Annotations
Gene Ontology
GO Biological Process (view graph)
ID Description Evidence Links
9117 nucleotide metabolism inferred from electronic annotation QuickGO AmiGO
GO Molecular Function (view graph)
ID Description Evidence Links
16787 hydrolase activity inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast CAA92956 Hypothetical protein F13H10.5 [Caenorhabditis elegans] ref|NP_502049.2| F13H10.5 [Caenorhabditis elegans] 0.0
blast CAE61970 Hypothetical protein CBG05971 [Caenorhabditis briggsae] 0.0
blast AAH77499 Enpp6-prov protein [Xenopus laevis] 1.0E-35
blast AAH77499 Enpp6-prov protein [Xenopus laevis] 2.0E-26
Protein Domains
Database ID Description E-Value
Pfam IPR002591 EMBL-EBI Type I phosphodiesterase/nucleotide pyrophosphatase 6.5E-108
Pfam IPR002591 EMBL-EBI Type I phosphodiesterase/nucleotide pyrophosphatase 1.3E-98
Trans Membrane
ID Number Of Domains Domain Boundaries
NP_502049.2 1 423-445
F13H10.5 1 423-445
Sequence
Target Sequence 
>C. ELEGANS:183647_AT
agaacacgatctaactctcatctaccatccatggattggagaagaaattcgccgaaaagg
tgttcatcacacaaatgaaaaacattcgaaagaggttcttcgctttgctcaaagcctgga
acgattgacggcacaagcacgagagcgtgtcgatttgaatgtgattgttgtatcgacaca
cggatttattgatgttccacggaagaatattagagtaatggatgagtatgtgccaatgga
actaatcgaaacaactgtgggaagtggtgcaatcaaacaattacaagtgaaaaaaggaaa
aactcaccaagtctacagtcaacttcatgatcataatccaattccaaatgttcatgttta
ttacacaacaccaaaatctgggaacttaccagatcattatcatttcaagaaaagcgatat
tgtagctgatcttgttcttcttgctgatcctggatatgcggtggttactgtaagtaactt
actgatcaaatcactgtacgatgtattccttttc

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
AGAACACGATCTAACTCTCATCTAC 524 73 534 Antisense
ATTCGCCGAAAAGGTGTTCATCACA 420 9 580 Antisense
GAAAGAGGTTCTTCGCTTTGCTCAA 648 359 621 Antisense
GATTGACGGCACAAGCACGAGAGCG 240 431 656 Antisense
GTGATTGTTGTATCGACACACGGAT 578 483 694 Antisense
GGAAAAACTCACCAAGTCTACAGTC 81 529 829 Antisense
GTCTACAGTCAACTTCATGATCATA 582 469 844 Antisense
GGGAACTTACCAGATCATTATCATT 31 495 913 Antisense
ATTGTAGCTGATCTTGTTCTTCTTG 126 5 952 Antisense
GATCCTGGATATGCGGTGGTTACTG 666 415 979 Antisense
ATCACTGTACGATGTATTCCTTTTC 619 27 1023 Antisense
Sequence Source Affymetrix Proprietary Database