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[183645_at]

Description F26G5.8 /REP_DB=WormBase Gene ID /WP=CE09703 /TR=O16933 /GB=AAC48040.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_high1_10_10 > 11      6grp_total > 18      4grp_total > 18      6grp_cgc > 01      6grp_high1_sub > De      6grp_total_sub > Decrease      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 157
1 2 3 4 range
A 53
(-1.7)
A 		62
(-1.4)
A 		19.4
(-3)
A 		176.4
(3)
P 		157
B 57.4
(-3)
M 		88.3
(1.9)
P 		67.4
(-1.4)
P 		95.2
(3)
P 		38
C 41.6
(-2.2)
A 		49.5
(-1.8)
P 		25
(-3)
A 		145.1
(3)
P 		120
avr 50.7
(-2.2) 		66.6
(-1.3) 		37.3
(-3) 		138.9
(3) 		102

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 68
1 2 3 4 5 6 range
A 81.2
(3)
P 		18.1
(-2.6)
A 		64.6
(1.5)
P 		13.7
(-3)
A 		58
(0.9)
A 		25.7
(-1.9)
A 		68
B 74.2
(3)
P 		67.6
(2.2)
P 		22.3
(-3)
A 		59.1
(1.3)
P 		26.7
(-2.5)
P 		47.6
(-0.1)
A 		52
C 22
(-3)
A 		30.8
(-1.4)
A 		23.7
(-2.7)
A 		55.9
(3)
P 		36.1
(-0.5)
A 		27.5
(-2)
P 		34
avr 59.1
(3) 		38.8
(-1.8) 		36.9
(-2.2) 		42.9
(-0.8) 		40.3
(-1.4) 		33.6
(-3) 		26
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 21
1 2 3 4 range
A 19.3
(1.1)
A 		13.5
(-0.6)
A 		5.1
(-3)
A 		25.8
(3)
P 		21
B 18.3
(-0.4)
M 		21.8
(3)
P 		15.6
(-3)
P 		20.3
(1.5)
P 		6
C 13.8
(-1.1)
A 		14.2
(-0.9)
P 		8.7
(-3)
A 		24.5
(3)
P 		16
avr 17.1
(0.2) 		16.5
(-0.1) 		9.8
(-3) 		23.5
(3) 		14

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 22
1 2 3 4 5 6 range
A 15
(1.9)
P 		6.4
(-1.8)
A 		14.1
(1.5)
P 		3.5
(-3)
A 		17.5
(3)
A 		6.3
(-1.8)
A 		14
B 25.8
(3)
P 		22.5
(2)
P 		5.4
(-3)
A 		15.7
(0)
P 		10.8
(-1.4)
P 		17.7
(0.6)
A 		20
C 8.2
(-0.7)
A 		9.4
(0.6)
A 		6
(-3)
A 		11.2
(2.5)
P 		11.7
(3)
A 		9.2
(0.4)
P 		6
avr 16.3
(3) 		12.8
(0.3) 		8.5
(-3) 		10.1
(-1.8) 		13.3
(0.7) 		11.1
(-1) 		8
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 183645_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.15243
Sequence Type Exemplar sequence
Representative Public ID F26G5.8 NCBI
Target Description F26G5.8 /REP_DB=WormBase Gene ID /WP=CE09703 /TR=O16933 /GB=AAC48040.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Design Representative Id based pipeline to a Affymetrix Proprietary Database identifier using 1 transcript(s).
Annotation Grade This is a grade R annotation.
Annotation Transcript Cluster (# of Matching Probes) F26G5.8
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
F26G5.8 F26G5.8 /REP_DB=WormBase Gene ID /WP=CE09703 /TR=O16933 /GB=AAC48040.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
C23H5.5 1/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:4953596-4954146(-) 50.77 100.0
Sequence
Target Sequence 
>C. ELEGANS:183645_AT
atgctcccatacctttgcataacaaagaagttcgccaaaaaagacacaatatcggtcaat
gacttgttggtgattaatgcagatcatcagagaaaatgtacagttttttgtgcattgatg
ataaaatttcaaaatttggaaacaaatgttacgatgctgaacacatttttggaataccat
ccagtcgagcatgattctaacaacgtgacactaattcccagtcagccatatattaggtct
ccaaataagttcctggtcaaaatggaaaaatgtgttcgctgcgtatcgatttttatgaac
ctgtgggaatttatgttatcaaccataatctttcatttgacaacagtcacaaattttttt
gctcactcggaacccatttttttcaggcatttttcgatttcgtttcttttcagcgttg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
ATGCTCCCATACCTTTGCATAACAA 489 41 13 Antisense
ATCGGTCAATGACTTGTTGGTGATT 167 35 63 Antisense
GGAATACCATCCAGTCGAGCATGAT 13 533 183 Antisense
GAGCATGATTCTAACAACGTGACAC 283 389 199 Antisense
GTGACACTAATTCCCAGTCAGCCAT 182 483 217 Antisense
AGTCAGCCATATATTAGGTCTCCAA 348 61 232 Antisense
AGGTCTCCAAATAAGTTCCTGGTCA 5 59 247 Antisense
AAATGTGTTCGCTGCGTATCGATTT 157 121 280 Antisense
GTCACAAATTTTTTTGCTCACTCGG 599 463 358 Antisense
CTCACTCGGAACCCATTTTTTTCAG 647 225 374 Antisense
TCGATTTCGTTTCTTTTCAGCGTTG 552 589 406 Antisense
Sequence Source Affymetrix Proprietary Database