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[183052_at]

Description C32H11.1 /REP_DB=WormBase Gene ID /WP=CE19708 /TR=Q9XTE4 /GB=CAA97437.1 /SUBMIT=HINXTON /CHR=4 /FEA=Sanger Annotation
Cluster 6grp_total > 06      4grp_total > 46      6grp_total_sub > Decrease      6grp_rule_based > S1      4grp_rule_based > L1      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 357
1 2 3 4 range
A 346.3
(3)
P 		61.9
(-2.3)
A 		42.3
(-2.7)
A 		24.1
(-3)
A 		322
B 365.1
(3)
P 		78.4
(-1.8)
A 		69.5
(-2)
A 		7.8
(-3)
A 		357
C 341.8
(3)
P 		86.4
(-2)
A 		61.4
(-2.5)
A 		38
(-3)
A 		304
avr 351.1
(3) 		75.6
(-2) 		57.7
(-2.4) 		23.3
(-3) 		328

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 112
1 2 3 4 5 6 range
A 106.9
(3)
A 		39.5
(-0.9)
A 		23.6
(-1.8)
A 		12.1
(-2.5)
A 		14.6
(-2.3)
A 		3.2
(-3)
A 		104
B 114.8
(3)
A 		52.9
(-0.4)
A 		72.3
(0.7)
A 		10.4
(-2.7)
A 		9.9
(-2.7)
A 		4.9
(-3)
A 		110
C 97.1
(3)
M 		95.6
(2.9)
A 		14.8
(-2.4)
A 		11
(-2.6)
A 		16.8
(-2.3)
A 		5.5
(-3)
A 		92
avr 106.3
(3) 		62.7
(0.4) 		36.9
(-1.1) 		11.2
(-2.6) 		13.8
(-2.5) 		4.5
(-3) 		102
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 124
1 2 3 4 range
A 126.1
(3)
P 		13.4
(-2.5)
A 		11.1
(-2.6)
A 		3.5
(-3)
A 		123
B 116.4
(3)
P 		19.4
(-2.1)
A 		16.1
(-2.2)
A 		1.7
(-3)
A 		115
C 113.1
(3)
P 		24.8
(-2)
A 		21.4
(-2.2)
A 		6.4
(-3)
A 		107
avr 118.5
(3) 		19.2
(-2.2) 		16.2
(-2.4) 		3.9
(-3) 		115

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 39
1 2 3 4 5 6 range
A 19.7
(3)
A 		14.1
(1.2)
A 		5.1
(-1.6)
A 		3.1
(-2.3)
A 		4.4
(-1.9)
A 		0.8
(-3)
A 		19
B 39.9
(3)
A 		17.6
(-0.5)
A 		17.6
(-0.5)
A 		2.7
(-2.9)
A 		4
(-2.7)
A 		1.8
(-3)
A 		38
C 36
(3)
M 		29.2
(1.8)
A 		3.8
(-2.6)
A 		2.2
(-2.9)
A 		5.4
(-2.4)
A 		1.8
(-3)
A 		34
avr 31.9
(3) 		20.3
(0.7) 		8.8
(-1.6) 		2.7
(-2.8) 		4.6
(-2.4) 		1.5
(-3) 		30
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 183052_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.9761
Sequence Type Exemplar sequence
Representative Public ID C32H11.1 NCBI
Target Description C32H11.1 /REP_DB=WormBase Gene ID /WP=CE19708 /TR=Q9XTE4 /GB=CAA97437.1 /SUBMIT=HINXTON /CHR=4 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_070062(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_070062 NCBI Caenorhabditis elegans C32H11.1 (C32H11.1) mRNA, complete cds. 11/11 None
C32H11.1 ENSEMBL cdna:known chromosome:CEL140:IV:12913073:12914926:-1 gene:C32H11.1 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrIV:12913078-12914932(-) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl C32H11.1
Entrez Gene 183126 Entrez gene
SwissProt Q9XTE4 EMBL-EBI
WormBase CE19708 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast CAA97437 Hypothetical protein C32H11.1 [Caenorhabditis elegans] emb|CAB05142.1| Hypothetical protein C32H11.1 [Caenorhabditis elegans] ref|NP_502463.1| C32H11.1 [Caenorhabditis elegans] 0.0
blast CAA97435 Hypothetical protein K08D8.4a [Caenorhabditis elegans] ref|NP_001023284.1| K08D8.4a [Caenorhabditis elegans] 1.0E-168
blast CAI59116 Hypothetical protein K08D8.4d [Caenorhabditis elegans] ref|NP_001023287.1| K08D8.4d [Caenorhabditis elegans] 1.0E-168
Protein Domains
Database ID Description E-Value
Pfam IPR003366 EMBL-EBI Protein of unknown function DUF141 8.4E-47
Sequence
Target Sequence 
>C. ELEGANS:183052_AT
aggatgttctatcattcttcactcgtatttctacgcaactgcagaggctcgaatttccag
acaaccagattacttgatgctcccggatagtttcccatacaatgccactctcaaaatcta
cggtgaaacactccaggatagcagcctgtttgcagcagtaaacaaatccaactaccagac
aatgttcccaatgaaagtcaccaattctctgaaaatctatcacctggatcacgatatagt
ctcgatcgatgtcactaataatgcagatgaagccaaatggagcaccgtgtacgatggacg
aaatatcaaggttcaatcaatggattacggtagaacaagtttttatcaggacacaatgga
aacctttacaactgaaccaaacacccaaatgtatttcaaattcaatgtgaagtattttga
tgtgaatggaccaacttctttggctatcaaagtttacaacaatgccaaaattgtctactc
ggaaacctacactgccacaaatctgccaactccgtacaacgtgaga

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
AGGATGTTCTATCATTCTTCACTCG 364 57 783 Antisense
TTCTACGCAACTGCAGAGGCTCGAA 416 689 811 Antisense
GAGGCTCGAATTTCCAGACAACCAG 8 407 826 Antisense
CAACCAGATTACTTGATGCTCCCGG 404 187 844 Antisense
GATAGTTTCCCATACAATGCCACTC 392 425 868 Antisense
CAATGCCACTCTCAAAATCTACGGT 228 181 882 Antisense
GGATAGCAGCCTGTTTGCAGCAGTA 246 511 918 Antisense
GAAGCCAAATGGAGCACCGTGTACG 159 345 1051 Antisense
GAATGGACCAACTTCTTTGGCTATC 654 329 1206 Antisense
GAAACCTACACTGCCACAAATCTGC 57 359 1264 Antisense
TCTGCCAACTCCGTACAACGTGAGA 504 609 1284 Antisense
Sequence Source Affymetrix Proprietary Database