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[183050_at]

Description C17D12.4 /REP_DB=WormBase Gene ID /WP=CE17408 /TR=O62066 /GB=CAB03892.1 /SUBMIT=HINXTON /CHR=1 /FEA=Sanger Annotation
Cluster 6grp_total > 36      4grp_total > 27      6grp_cgc > 04      6grp_cgc_sub > Cu      6grp_total_sub > Cup      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 47
1 2 3 4 range
A 12
(-1.6)
A 		32
(1.6)
A 		3.1
(-3)
A 		40.7
(3)
A 		38
B 5.8
(-3)
A 		49
(3)
A 		18.1
(-1.3)
A 		7.7
(-2.7)
A 		43
C 9.2
(-1.5)
A 		2.5
(-3)
A 		4.3
(-2.6)
A 		29.8
(3)
A 		27
avr 9
(-2.8) 		27.8
(3) 		8.5
(-3) 		26.1
(2.5) 		19

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 27
1 2 3 4 5 6 range
A 2.6
(-2.8)
A 		28.4
(3)
A 		1.8
(-3)
A 		3.2
(-2.7)
A 		5.7
(-2.1)
A 		2.2
(-2.9)
A 		27
B 17.3
(3)
A 		6.8
(-1.2)
A 		6.2
(-1.4)
A 		2.3
(-3)
A 		4.4
(-2.2)
A 		16.3
(2.6)
A 		15
C 6.9
(3)
A 		3.1
(-3)
A 		3.9
(-1.7)
A 		5
(-0)
A 		3.6
(-2.2)
A 		5.5
(0.8)
A 		4
avr 8.9
(0.5) 		12.8
(3) 		4
(-2.7) 		3.5
(-3) 		4.6
(-2.3) 		8
(-0.1) 		9
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 11
1 2 3 4 range
A 4.4
(0.5)
A 		7
(3)
A 		0.8
(-3)
A 		6
(2)
A 		6
B 1.9
(-2.8)
A 		12.1
(3)
A 		4.2
(-1.5)
A 		1.6
(-3)
A 		11
C 3
(0.2)
A 		0.7
(-3)
A 		1.5
(-1.9)
A 		5
(3)
A 		4
avr 3.1
(-1.8) 		6.6
(3) 		2.2
(-3) 		4.2
(-0.3) 		4

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 10
1 2 3 4 5 6 range
A 0.5
(-2.9)
A 		10.1
(3)
A 		0.4
(-3)
A 		0.8
(-2.8)
A 		1.7
(-2.2)
A 		0.5
(-2.9)
A 		10
B 6
(2.9)
A 		2.3
(-1.1)
A 		1.5
(-2)
A 		0.6
(-3)
A 		1.8
(-1.7)
A 		6.1
(3)
A 		6
C 2.6
(3)
A 		0.9
(-3)
A 		1
(-2.6)
A 		1
(-2.6)
A 		1.2
(-1.9)
A 		1.8
(0.2)
A 		2
avr 3
(0.7) 		4.4
(3) 		1
(-2.7) 		0.8
(-3) 		1.6
(-1.7) 		2.8
(0.3) 		4
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 183050_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.1310
Sequence Type Exemplar sequence
Representative Public ID C17D12.4 NCBI
Target Description C17D12.4 /REP_DB=WormBase Gene ID /WP=CE17408 /TR=O62066 /GB=CAB03892.1 /SUBMIT=HINXTON /CHR=1 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Design Representative Id based pipeline to a Affymetrix Proprietary Database identifier using 1 transcript(s).
Annotation Grade This is a grade R annotation.
Annotation Transcript Cluster (# of Matching Probes) C17D12.4
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
C17D12.4 C17D12.4 /REP_DB=WormBase Gene ID /WP=CE17408 /TR=O62066 /GB=CAB03892.1 /SUBMIT=HINXTON /CHR=1 /FEA=Sanger Annotation None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrI:11600167-11600835(-) 100.0 100.0
Sequence
Target Sequence 
>C. ELEGANS:183050_AT
tgcgagacgccgggagatatccgcgtggtgtagagggggagggaaaagagcaaatttggt
gcagaatgggcttcacaaatggggagagagggagggtatcagcgtcacgcgatttgtaga
gggaaatgggaaaacccaaccaacctgcccgacaaaaagcttaatagcatccggatcctt
caccggaaacccatttgaatctgtcgacgaggtgctactggcgcgcatctcgtgctgctg
ctgccccatatcagcagccgacggagccggagcaagtgcaactgtcg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TGCGAGACGCCGGGAGATATCCGCG 9 585 21 Antisense
GAGATATCCGCGTGGTGTAGAGGGG 366 397 34 Antisense
GAATGGGCTTCACAAATGGGGAGAG 46 331 84 Antisense
AGAGAGGGAGGGTATCAGCGTCACG 673 67 105 Antisense
TCAGCGTCACGCGATTTGTAGAGGG 438 625 119 Antisense
CAACCTGCCCGACAAAAAGCTTAAT 205 185 161 Antisense
GCTTAATAGCATCCGGATCCTTCAC 367 305 179 Antisense
TCCGGATCCTTCACCGGAAACCCAT 45 261 190 Antisense
GGAAACCCATTTGAATCTGTCGACG 563 527 205 Antisense
AATCTGTCGACGAGGTGCTACTGGC 645 169 218 Antisense
GGAGCCGGAGCAAGTGCAACTGTCG 629 521 283 Antisense
Sequence Source Affymetrix Proprietary Database