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[182909_at]

Description F58B6.1 /REP_DB=WormBase Gene ID /WP=CE19471 /TR=Q9TYU8 /GB=AAC78204.1 /SUBMIT=ST.LOUIS /CHR=3 /FEA=Sanger Annotation
Cluster 6grp_total > 33      4grp_total > 36      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 77
1 2 3 4 range
A 99.1
(-1.6)
A 		130.2
(3)
A 		89.6
(-3)
A 		97.2
(-1.9)
A 		41
B 91.1
(0.1)
A 		126.6
(3)
A 		77.2
(-1)
A 		53.2
(-3)
A 		73
C 88.9
(-1.2)
A 		101.4
(0.1)
A 		71.3
(-3)
A 		129.9
(3)
A 		59
avr 93
(-1) 		119.4
(3) 		79.4
(-3) 		93.4
(-0.9) 		40

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 111
1 2 3 4 5 6 range
A 126.4
(2.5)
A 		83.6
(-0.9)
A 		132.1
(3)
M 		57.2
(-3)
A 		92.5
(-0.2)
A 		79.7
(-1.2)
A 		75
B 85.2
(2.3)
P 		92.5
(3)
A 		77.2
(1.5)
A 		50.9
(-1.2)
A 		33.1
(-3)
A 		74.5
(1.2)
A 		59
C 88.4
(1.5)
A 		77.8
(0.8)
A 		92.4
(1.8)
A 		110.2
(3)
A 		33
(-2.2)
A 		21.6
(-3)
A 		89
avr 100
(2.9) 		84.6
(1) 		100.6
(3) 		72.8
(-0.5) 		52.9
(-3) 		58.6
(-2.3) 		48
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 25
1 2 3 4 range
A 36.1
(3)
A 		28.3
(0.9)
A 		23.4
(-0.5)
A 		14.2
(-3)
A 		22
B 29.1
(2.3)
A 		31.3
(3)
A 		17.9
(-1)
A 		11.3
(-3)
A 		20
C 29.4
(3)
A 		29.2
(2.8)
A 		24.8
(-0.7)
A 		21.9
(-3)
A 		8
avr 31.5
(3) 		29.6
(2.3) 		22
(-0.6) 		15.8
(-3) 		16

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 26
1 2 3 4 5 6 range
A 23.3
(0.5)
A 		29.7
(3)
A 		28.8
(2.6)
M 		14.5
(-3)
A 		27.9
(2.3)
A 		19.4
(-1.1)
A 		15
B 29.6
(2.6)
P 		30.8
(3)
A 		18.8
(-1.1)
A 		13.5
(-3)
A 		13.4
(-3)
A 		27.8
(2)
A 		17
C 32.8
(3)
A 		23.7
(0.9)
A 		23.5
(0.8)
A 		22.2
(0.5)
A 		10.7
(-2.2)
A 		7.2
(-3)
A 		26
avr 28.6
(3) 		28.1
(2.7) 		23.7
(0.5) 		16.7
(-3) 		17.3
(-2.7) 		18.1
(-2.3) 		12
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 182909_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.8211
Sequence Type Exemplar sequence
Representative Public ID F58B6.1 NCBI
Target Description F58B6.1 /REP_DB=WormBase Gene ID /WP=CE19471 /TR=Q9TYU8 /GB=AAC78204.1 /SUBMIT=ST.LOUIS /CHR=3 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_064934(9)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_064934 NCBI Caenorhabditis elegans F58B6.1 (F58B6.1) mRNA, complete cds. 9/11 None
F58B6.1 ENSEMBL cdna:known chromosome:CEL140:III:1112711:1113351:-1 gene:F58B6.1 9/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000003677 7/11 Cross Hyb Matching Probes None
GENEFINDER00000003682 8/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrIII:1112710-1115903(-) 78.36 100.0
Public Domain and Genome References
Gene Title
Ensembl F58B6.1
Entrez Gene 186497 Entrez gene
SwissProt Q9TYU8 EMBL-EBI
WormBase CE32448 Wormbase
Functional Annotations
Gene Ontology
GO Biological Process (view graph)
ID Description Evidence Links
6629 lipid metabolism inferred from electronic annotation QuickGO AmiGO
GO Molecular Function (view graph)
ID Description Evidence Links
4806 triacylglycerol lipase activity inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast AAN63397 Hypothetical protein F58B6.1 [Caenorhabditis elegans] ref|NP_497335.2| F58B6.1 [Caenorhabditis elegans] 1.0E-88
blast T33811 hypothetical protein F58B6.1 - Caenorhabditis elegans 1.0E-88
blast AAC19230 Hypothetical protein T10B5.7 [Caenorhabditis elegans] ref|NP_503517.1| T10B5.7 [Caenorhabditis elegans] 1.0E-30
Protein Domains
Database ID Description E-Value
Pfam IPR002921 EMBL-EBI Lipase, class 3 2.9E-23
Sequence
Target Sequence 
>C. ELEGANS:182909_AT
atgaggtttggattggcggccactcgttgggtggttcaatggcggctttggcttcaaatt
ttgtgattgccaatggcctcgccacgtcttctcgcctgaaaatgatcacattcggcgagc
ccaggacaggtgataaggcattcgccgatactcacgatcagctggtaccgtactcttacc
gagtaatccacaaaagggacattgtgtcccatattccattggacggacaagctgggttcc
atcatcatcgcaatgaaatttggaaaaataaattttcaaataattttttgaaaacagctc
gccaagaccttttgaatgacacccatcatgccaggttcccgtccattttgagcttcgaca
cagctaaaatcggtgctacagtaccccatgtggcgagacccaaatt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
ATGAGGTTTGGATTGGCGGCCACTC 144 41 701 Antisense
TTCAATGGCGGCTTTGGCTTCAAAT 669 685 735 Antisense
TTTGTGATTGCCAATGGCCTCGCCA 458 667 760 Antisense
TGATCACATTCGGCGAGCCCAGGAC 690 563 803 Antisense
TAAGGCATTCGCCGATACTCACGAT 262 635 834 Antisense
TCAGCTGGTACCGTACTCTTACCGA 602 619 858 Antisense
GGACATTGTGTCCCATATTCCATTG 684 525 897 Antisense
GGACAAGCTGGGTTCCATCATCATC 305 527 925 Antisense
AAACAGCTCGCCAAGACCTTTTGAA 389 129 992 Antisense
TTCCCGTCCATTTTGAGCTTCGACA 3 699 1036 Antisense
TACCCCATGTGGCGAGACCCAAATT 311 629 1082 Antisense
Sequence Source Affymetrix Proprietary Database