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[182331_at]

Description C31A11.7 /REP_DB=WormBase Gene ID /WP=CE15658 /TR=O45283 /GB=CAB05690.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 23      4grp_total > 38      6grp_total_sub > Decrease      6grp_rule_based > S2      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 86
1 2 3 4 range
A 73.6
(3)
A 		24.8
(-3)
A 		27.3
(-2.7)
A 		38
(-1.4)
A 		49
B 85.8
(3)
A 		69.2
(1.8)
A 		2
(-3)
A 		5.6
(-2.7)
A 		84
C 88
(3)
P 		27
(-3)
A 		27.1
(-3)
A 		56.8
(-0.1)
A 		61
avr 82.5
(3) 		40.3
(-1) 		18.8
(-3) 		33.5
(-1.6) 		64

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 89
1 2 3 4 5 6 range
A 45
(1.2)
A 		59.7
(3)
A 		43.5
(1)
A 		59.8
(3)
A 		10.6
(-3)
A 		29
(-0.8)
A 		49
B 68.1
(3)
A 		46.5
(1.1)
A 		45.5
(1)
A 		42.7
(0.7)
A 		30.9
(-0.3)
A 		1.4
(-3)
A 		67
C 67.8
(1.3)
A 		90.3
(3)
A 		73.6
(1.8)
A 		35.9
(-1)
A 		9.2
(-3)
A 		22
(-2.1)
A 		81
avr 60.3
(2.4) 		65.5
(3) 		54.2
(1.6) 		46.1
(0.6) 		16.9
(-3) 		17.5
(-2.9) 		49
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 29
1 2 3 4 range
A 26.8
(3)
A 		5.4
(-3)
A 		7.1
(-2.5)
A 		5.6
(-2.9)
A 		21
B 27.3
(3)
A 		17.1
(0.7)
A 		0.5
(-3)
A 		1.2
(-2.8)
A 		27
C 29.1
(3)
P 		7.8
(-3)
A 		9.4
(-2.5)
A 		9.6
(-2.5)
A 		21
avr 27.7
(3) 		10.1
(-1.8) 		5.7
(-2.9) 		5.5
(-3) 		22

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 27
1 2 3 4 5 6 range
A 8.3
(-1.3)
A 		21.2
(3)
A 		9.5
(-0.9)
A 		15.2
(1)
A 		3.2
(-3)
A 		7.1
(-1.7)
A 		18
B 23.7
(3)
A 		15.5
(0.9)
A 		11.1
(-0.3)
A 		11.3
(-0.2)
A 		12.6
(0.1)
A 		0.5
(-3)
A 		23
C 25.1
(2.4)
A 		27.5
(3)
A 		18.7
(0.8)
A 		7.2
(-2)
A 		3
(-3)
A 		7.4
(-1.9)
A 		25
avr 19
(2.1) 		21.4
(3) 		13.1
(-0) 		11.2
(-0.7) 		6.3
(-2.5) 		5
(-3) 		16
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 182331_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.13983
Sequence Type Exemplar sequence
Representative Public ID C31A11.7 NCBI
Target Description C31A11.7 /REP_DB=WormBase Gene ID /WP=CE15658 /TR=O45283 /GB=CAB05690.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_074719(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_074719 NCBI Caenorhabditis elegans C31A11.7 (C31A11.7) mRNA, complete cds. 11/11 None
C31A11.7 ENSEMBL cdna:known chromosome:CEL140:V:16312512:16317364:1 gene:C31A11.7 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000000584 7/11 Cross Hyb Matching Probes None
GENEFINDER00000000586 3/11 Cross Hyb Matching Probes None
GENEFINDER00000000588 7/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:16312511-16317335(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl C31A11.7
Entrez Gene 180096 Entrez gene
SwissProt O45283 EMBL-EBI
WormBase CE36106 Wormbase
Functional Annotations
Ortholog
ID Title Organism
DROSOPHILA_2:1629934_AT dm
DROSGENOME1:145377_AT dm
Gene Ontology
GO Molecular Function (view graph)
ID Description Evidence Links
16747 transferase activity, transferring groups other than amino-acyl groups inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast CAB05690 Hypothetical protein C31A11.7 [Caenorhabditis elegans] ref|NP_507120.2| C31A11.7 [Caenorhabditis elegans] 0.0
blast CAB05687 Hypothetical protein C31A11.5 [Caenorhabditis elegans] ref|NP_507118.1| C31A11.5 [Caenorhabditis elegans] 0.0
blast CAB04331 Hypothetical protein F36G9.12 [Caenorhabditis elegans] ref|NP_507007.1| F36G9.12 [Caenorhabditis elegans] 0.0
Protein Domains
Database ID Description E-Value
Pfam IPR002656 EMBL-EBI Acyltransferase 3 family 1.3E-7
Trans Membrane
ID Number Of Domains Domain Boundaries
NP_507120.2 13 5-22,198-220,240-259,272-291,311-333,357-374,427-449,456-478,498-520,527-549,569-591,604-623,638-660
C31A11.7 13 5-22,198-220,240-259,272-291,311-333,357-374,427-449,456-478,498-520,527-549,569-591,604-623,638-660
Sequence
Target Sequence 
>C. ELEGANS:182331_AT
tccgatgtcctccgtatcttataggtcttcttattggctacggtctagctgtatttggtc
aaagaaaaatccggattcattggttccttgcggtgattggatggcttgtggcttttggtc
ttggaatggcatgcatgttttccacatatgattacgacaaaggtgcttactggagcatct
ttgcccgagccacctactacaacttttcgcggatagcctggtctattgcagtttcctggg
ttattgttgcaaaccatatgggatggggaggccccatcgatgcatttatgtcccatccga
tgtggcagccacttgggagactgtcatattgcgcgtatattgtacactttttcacacttt
tttggtacctaaatattaatgattccagtatgcatttttactcaacgtttcaagtgttta
tttactacgcggtgccggcatgcctcctgtcctacattttcgctttcttctggagctcat
tatttgaaattccgatactgaaactgaagaaaatgatgattgaagcaattctccaaagaa
accaacggtcagaactcacacaggtgga

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TCCGATGTCCTCCGTATCTTATAGG 246 595 1472 Antisense
TAGGTCTTCTTATTGGCTACGGTCT 404 653 1493 Antisense
ATCCGGATTCATTGGTTCCTTGCGG 494 37 1540 Antisense
GGTGCTTACTGGAGCATCTTTGCCC 311 501 1633 Antisense
ACAACTTTTCGCGGATAGCCTGGTC 101 111 1670 Antisense
TAGCCTGGTCTATTGCAGTTTCCTG 261 649 1685 Antisense
CCCCATCGATGCATTTATGTCCCAT 226 261 1743 Antisense
TTATGTCCCATCCGATGTGGCAGCC 43 681 1757 Antisense
TGTGGCAGCCACTTGGGAGACTGTC 509 555 1772 Antisense
ATTTTCGCTTTCTTCTGGAGCTCAT 301 15 1927 Antisense
AACGGTCAGAACTCACACAGGTGGA 486 143 2015 Antisense
Sequence Source Affymetrix Proprietary Database