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[182145_at]

Description C45E1.4 /REP_DB=WormBase Gene ID /WP=CE16929 /TR=O44961 /GB=AAC24284.1 /SUBMIT=ST.LOUIS /CHR=1 /FEA=Sanger Annotation
Cluster 6grp_total > 0      4grp_total > 19      6grp_total_sub > Hat      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 67
1 2 3 4 range
A 44.7
(0.7)
A 		11.1
(-3)
A 		25.5
(-1.4)
A 		66.1
(3)
A 		55
B 25
(-1.7)
A 		39.1
(-0.3)
A 		11.4
(-3)
A 		73.3
(3)
A 		62
C 32.8
(-1.7)
A 		63.8
(1.5)
A 		19.9
(-3)
A 		78.4
(3)
A 		59
avr 34.2
(-1.3) 		38
(-0.9) 		18.9
(-3) 		72.6
(3) 		54

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 62
1 2 3 4 5 6 range
A 24.2
(1.1)
A 		5.7
(-3)
A 		7.6
(-2.6)
A 		5.9
(-3)
A 		33
(3)
A 		10.5
(-1.9)
A 		27
B 8.1
(-3)
A 		40.7
(2.8)
A 		41.9
(3)
A 		8.6
(-2.9)
A 		9.8
(-2.7)
A 		31.9
(1.2)
A 		34
C 6.5
(-3)
A 		67.6
(3)
A 		6
(-3)
A 		15.7
(-2.1)
A 		30.7
(-0.6)
A 		29.6
(-0.7)
A 		62
avr 12.9
(-2.4) 		38
(3) 		18.5
(-1.2) 		10.1
(-3) 		24.5
(0.1) 		24
(-0) 		28
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 16
1 2 3 4 range
A 16.3
(3)
A 		2.4
(-3)
A 		6.7
(-1.1)
A 		9.7
(0.2)
A 		14
B 8
(-0.5)
A 		9.7
(0.3)
A 		2.6
(-3)
A 		15.6
(3)
A 		13
C 10.8
(-0.9)
A 		18.3
(3)
A 		6.9
(-3)
A 		13.2
(0.3)
A 		11
avr 11.7
(2.1) 		10.1
(0.8) 		5.4
(-3) 		12.8
(3) 		7

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 19
1 2 3 4 5 6 range
A 4.5
(-0.9)
A 		2
(-2.6)
A 		1.6
(-2.9)
A 		1.5
(-3)
A 		9.9
(3)
A 		2.6
(-2.2)
A 		8
B 2.8
(-2.7)
A 		13.6
(3)
A 		10.2
(1.2)
A 		2.3
(-3)
A 		4
(-2.1)
A 		11.9
(2.1)
A 		11
C 2.4
(-2.7)
A 		20.6
(3)
A 		1.5
(-3)
A 		3.2
(-2.5)
A 		9.9
(-0.4)
A 		9.9
(-0.4)
A 		19
avr 3.2
(-2.4) 		12.1
(3) 		4.4
(-1.7) 		2.3
(-3) 		7.9
(0.4) 		8.1
(0.6) 		10
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 182145_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.297
Sequence Type Exemplar sequence
Representative Public ID C45E1.4 NCBI
Target Description C45E1.4 /REP_DB=WormBase Gene ID /WP=CE16929 /TR=O44961 /GB=AAC24284.1 /SUBMIT=ST.LOUIS /CHR=1 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Genome Target Overlap based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade B annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_058703
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
GENEFINDER00000025550 ENSEMBL cdna:GeneFinder chromosome:CEL140:I:3110722:3112959:-1 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000025547 3/11 Cross Hyb Matching Probes None
GENEFINDER00000003585 1/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrI:3110721-3117626(-) 90.03 100.0
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast T32892 hypothetical protein C45E1.4 - Caenorhabditis elegans 6.0E-94
Sequence
Target Sequence 
>C. ELEGANS:182145_AT
tcacactgccaatgcacgagagacctttggaaagaagttttttggagtccttcgaaagaa
cttgaggaactccaacagaaaaggaagtggacttgctgcacaatggaaattattaatttt
gaagtcaaaatctatagtttttcggtcaaatattttaaaacccaatttgtggtgtgtgtg
cggcaaatttcaaaatttctcgagtccggcaaatttgacaaatttgccgcatacccatgg
tttacacccattcctggcacgcatcgagagagaaagaaactcctcgtctgccattcattt
gtgctcccactctccgcgccccgagcccgaatgatgacatctgctgtctgtggagtcttg
accctcatggtgattgtgcatgaggcagctgtctgg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TCACACTGCCAATGCACGAGAGACC 612 627 589 Antisense
CCCAATTTGTGGTGTGTGTGCGGCA 367 255 749 Antisense
ATTTCAAAATTTCTCGAGTCCGGCA 705 13 775 Antisense
GACAAATTTGCCGCATACCCATGGT 32 367 805 Antisense
ATACCCATGGTTTACACCCATTCCT 355 23 819 Antisense
CATTCCTGGCACGCATCGAGAGAGA 461 217 837 Antisense
AGAGAAAGAAACTCCTCGTCTGCCA 237 69 857 Antisense
CCCGAGCCCGAATGATGACATCTGC 271 259 908 Antisense
GACATCTGCTGTCTGTGGAGTCTTG 606 369 924 Antisense
GAGTCTTGACCCTCATGGTGATTGT 426 399 941 Antisense
GATTGTGCATGAGGCAGCTGTCTGG 593 433 960 Antisense
Sequence Source Affymetrix Proprietary Database