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[182118_s_at]

Description K03D10.3 /REP_DB=WormBase Gene ID /WP=CE23850 /TR=Q9U3C3 /GB=CAB04552.2 /SUBMIT=HINXTON /CHR=1 /FEA=Sanger Annotation
Cluster 6grp_total > 18      4grp_total > 23      6grp_total_sub > Decrease      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 88
1 2 3 4 range
A 93.7
(3)
A 		28.6
(-2.7)
A 		24.7
(-3)
A 		91.7
(2.8)
A 		69
B 44.6
(3)
A 		16
(-2)
A 		27.4
(-0)
A 		10.3
(-3)
A 		34
C 27.7
(1.4)
A 		10.3
(-2.2)
A 		6.2
(-3)
A 		35.8
(3)
A 		30
avr 55.3
(3) 		18.3
(-3) 		19.4
(-2.8) 		45.9
(1.5) 		37

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 59
1 2 3 4 5 6 range
A 22.9
(0.9)
A 		26
(1.7)
A 		8.2
(-3)
A 		18.6
(-0.2)
A 		21.6
(0.6)
A 		30.7
(3)
A 		23
B 32.7
(3)
A 		23.9
(0.8)
A 		17.7
(-0.7)
A 		22.5
(0.5)
A 		8.3
(-3)
A 		31
(2.6)
A 		24
C 67.5
(3)
A 		19.1
(-2.4)
A 		13.5
(-3)
A 		46.3
(0.6)
A 		23.1
(-1.9)
A 		24.6
(-1.8)
A 		54
avr 41
(3) 		23
(-0.9) 		13.1
(-3) 		29.1
(0.4) 		17.7
(-2) 		28.8
(0.4) 		28
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 32
1 2 3 4 range
A 34.1
(3)
A 		6.2
(-3)
A 		6.5
(-2.9)
A 		13.4
(-1.5)
A 		28
B 14.2
(3)
A 		3.9
(-2.2)
A 		6.4
(-0.9)
A 		2.2
(-3)
A 		12
C 9.2
(3)
A 		2.9
(-2.4)
A 		2.2
(-3)
A 		6
(0.3)
A 		7
avr 19.2
(3) 		4.3
(-3) 		5
(-2.7) 		7.2
(-1.8) 		15

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 23
1 2 3 4 5 6 range
A 4.2
(-1.1)
A 		9.3
(3)
A 		1.8
(-3)
A 		4.7
(-0.7)
A 		6.5
(0.8)
A 		7.5
(1.6)
A 		8
B 11.4
(2.9)
A 		8
(0.4)
A 		4.3
(-2.3)
A 		6
(-1.1)
A 		3.4
(-3)
A 		11.6
(3)
A 		8
C 25
(3)
A 		5.8
(-2.3)
A 		3.4
(-3)
A 		9.3
(-1.4)
A 		7.5
(-1.9)
A 		8.2
(-1.7)
A 		22
avr 13.5
(3) 		7.7
(-0.4) 		3.2
(-3) 		6.7
(-1) 		5.8
(-1.5) 		9.1
(0.4) 		10
NetAffx Links Cluster Members
Consensus/Exemplar
Group Members
GeneChip Array Information
Probe Set ID 182118_s_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.432
Sequence Type Exemplar sequence
Representative Public ID K03D10.3 NCBI
Target Description K03D10.3 /REP_DB=WormBase Gene ID /WP=CE23850 /TR=Q9U3C3 /GB=CAB04552.2 /SUBMIT=HINXTON /CHR=1 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_061066(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_061066 NCBI Caenorhabditis elegans K03D10.3 (K03D10.3) mRNA, complete cds. 11/11 None
GENEFINDER00000042296 ENSEMBL cdna:GeneFinder chromosome:CEL140:I:14126639:14134740:1 10/11 None
K03D10.3 ENSEMBL cdna:known chromosome:CEL140:I:14126876:14135291:1 gene:K03D10.3 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrI:14126806-14134898(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl K03D10.3
Entrez Gene 173281 Entrez gene
SwissProt Q9U3C3 EMBL-EBI
WormBase CE23850 Wormbase
Functional Annotations
Ortholog
ID Title Organism
ATH1-121501:250494_AT histone acetyltransferase, putative at
CANINE:1602470_AT similar to MYST histone acetyltransferase 1 (predicted) cfa
CANINE:1587395_AT similar to MYST histone acetyltransferase 1 (predicted) cfa
CANINE_2:CFA.2137.2.S1_AT similar to MYST histone acetyltransferase 1 (predicted) cfa
CANINE_2:CFA.2137.2.S1_X_AT similar to MYST histone acetyltransferase 1 (predicted) cfa
CANINE_2:CFAAFFX.25744.1.S1_S_AT similar to MYST histone acetyltransferase 1 (predicted) cfa
DROSOPHILA_2:1633429_AT males absent on the first dm
DROSGENOME1:143755_AT males absent on the first dm
HU35KSUBC:RC_AA464974_S_AT MYST histone acetyltransferase 1 hs
U133_X3P:HS.42343.1.S1_3P_X_AT MYST histone acetyltransferase 1 hs
U133_X3P:HS.42343.0.S1_3P_A_AT MYST histone acetyltransferase 1 hs
HG-U133A_2:214885_AT MYST histone acetyltransferase 1 hs
HG-U133_PLUS_2:214885_AT MYST histone acetyltransferase 1 hs
HG-U133A:214885_AT MYST histone acetyltransferase 1 hs
HG-U133A_2:221820_S_AT MYST histone acetyltransferase 1 hs
HG-U133_PLUS_2:221820_S_AT MYST histone acetyltransferase 1 hs
HG-U133A:221820_S_AT MYST histone acetyltransferase 1 hs
HG-U95AV2:35986_AT MYST histone acetyltransferase 1 hs
HG-U95AV2:35987_G_AT MYST histone acetyltransferase 1 hs
HG-U95AV2:35988_I_AT MYST histone acetyltransferase 1 hs
HG-U95B:43027_AT MYST histone acetyltransferase 1 hs
HG-U95B:43028_G_AT MYST histone acetyltransferase 1 hs
HG-U95C:60845_AT MYST histone acetyltransferase 1 hs
HU35KSUBA:RC_AA460000_AT MYST histone acetyltransferase 1 hs
MOUSE430_2:1432080_S_AT MYST histone acetyltransferase 1 mm
MOE430B:1432080_S_AT MYST histone acetyltransferase 1 mm
MU19KSUBA:TC16444_AT MYST histone acetyltransferase 1, mRNA (cDNA clone MGC:30369 IMAGE:5136304) mm
MU19KSUBC:TC42057_AT MYST histone acetyltransferase 1, mRNA (cDNA clone MGC:30369 IMAGE:5136304) mm
RG-U34C:RC_AI234237_AT MYST histone acetyltransferase 1 (predicted) rn
Gene Ontology
GO Biological Process (view graph)
ID Description Evidence Links
6333 chromatin assembly or disassembly inferred from electronic annotation QuickGO AmiGO
GO Cellular Component (view graph)
ID Description Evidence Links
785 chromatin inferred from electronic annotation QuickGO AmiGO
5634 nucleus inferred from electronic annotation QuickGO AmiGO
GO Molecular Function (view graph)
ID Description Evidence Links
3682 chromatin binding inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast CAB04552 Hypothetical protein K03D10.3 [Caenorhabditis elegans] ref|NP_493467.1| K03D10.3 [Caenorhabditis elegans] 0.0
blast CAE71810 Hypothetical protein CBG18825 [Caenorhabditis briggsae] 1.0E-162
blast EAA00103 ENSANGP00000016550 [Anopheles gambiae str. PEST] ref|XP_320309.2| ENSANGP00000016550 [Anopheles gambiae str. PEST] 1.0E-88
Protein Domains
Database ID Description E-Value
Pfam IPR002717 EMBL-EBI MOZ/SAS-like protein 4.2E-123
Pfam IPR002717 EMBL-EBI MOZ/SAS-like protein 4.2E-123
Sequence
Target Sequence 
>C. ELEGANS:182118_S_AT
agctatcccgccgcgaaggatacattggaatgcccgaaaaaccgttgtcagacctcggaa
aagtgtcatatcgcagctattggtggtggcgactgatgaaattgtttcatatacaccagg
gacatacagtaaccgccacgtttttgtcgaatgagtcgggcatcgccgtcgatgatattg
tttcgacgttgattacgatgcgcatgtgccgacagtataaggaacccgaattcattcccg
gcgagtggtacgtacgaattcatcgaaaaatagtggatcattgtgtaatgtgtggctatg
gtaaaccgccaaggctcctactcgaccggaccaaagtccgctgggctccggcccaaactc
ggcccgaattcgaacgacaacagcaacggacggccgcagcgatgacgtcacgcagggcct
cgaaatcgcaaaacgtcacacccctggtcacgcccctagccacgcccccaattgagcaga
agcctgaagacacctacaccccgtcgccgctgacagaccaccatgtagctacggat

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
AGCTATCCCGCCGCGAAGGATACAT 264 79 1097 Antisense
GGAATGCCCGAAAAACCGTTGTCAG 19 533 1123 Antisense
CATACAGTAACCGCCACGTTTTTGT 631 211 1219 Antisense
AGTCGGGCATCGCCGTCGATGATAT 594 59 1250 Antisense
TACGATGCGCATGTGCCGACAGTAT 236 647 1290 Antisense
TTCATTCCCGGCGAGTGGTACGTAC 571 589 1327 Antisense
ATGGTAAACCGCCAAGGCTCCTACT 293 49 1394 Antisense
CGACCGGACCAAAGTCCGCTGGGCT 466 249 1419 Antisense
CGAACGACAACAGCAACGGACGGCC 326 251 1467 Antisense
TCACGCAGGGCCTCGAAATCGCAAA 311 621 1504 Antisense
GACAGACCACCATGTAGCTACGGAT 243 367 1608 Antisense
Sequence Source Affymetrix Proprietary Database